Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 AL157996.1-201ENST00000624684 2299 ntBASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 AP000593.2-201ENST00000542775 1433 ntBASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AC106820.3-201ENST00000561653 397 ntBASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AC009486.1-201ENST00000569860 813 ntBASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AC010319.3-201ENST00000597028 470 ntBASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AL359881.3-201ENST00000602640 1721 ntBASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 AC111170.3-201ENST00000624282 2464 ntBASIC13.61□□□□□ -0.23
RSPO3Q9BXY4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 ALG3P1-201ENST00000508806 1114 ntBASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RSPO3Q9BXY4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms