Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCA3Q99758 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.04■□□□□ 0.64
ABCA3Q99758 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
ABCA3Q99758 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA3Q99758 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA3Q99758 AP000244.1-201ENST00000424582 201 ntBASIC19.04■□□□□ 0.64
ABCA3Q99758 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA3Q99758 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA3Q99758 GPX3-202ENST00000517973 612 ntTSL 3 BASIC19.04■□□□□ 0.64
ABCA3Q99758 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA3Q99758 AC005586.2-201ENST00000563946 837 ntBASIC19.04■□□□□ 0.64
ABCA3Q99758 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC19.04■□□□□ 0.64
ABCA3Q99758 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA3Q99758 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ABCA3Q99758 AL009176.1-201ENST00000607876 650 ntBASIC19.04■□□□□ 0.64
ABCA3Q99758 URAHP-205ENST00000610227 398 ntBASIC19.04■□□□□ 0.64
ABCA3Q99758 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC19.04■□□□□ 0.64
ABCA3Q99758 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA3Q99758 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA3Q99758 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCA3Q99758 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA3Q99758 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA3Q99758 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA3Q99758 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.04■□□□□ 0.64
ABCA3Q99758 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC19.04■□□□□ 0.64
ABCA3Q99758 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.04■□□□□ 0.64
ABCA3Q99758 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA3Q99758 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
ABCA3Q99758 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ABCA3Q99758 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ABCA3Q99758 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
ABCA3Q99758 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
ABCA3Q99758 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
ABCA3Q99758 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 HLA-DMA-202ENST00000395303 1007 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 FDPSP7-201ENST00000429043 1054 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC19.03■□□□□ 0.64
ABCA3Q99758 ASS1P2-201ENST00000439895 1223 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 RN7SL375P-201ENST00000492442 298 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 BCL2L12P1-201ENST00000508390 733 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC19.03■□□□□ 0.64
ABCA3Q99758 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 AC079414.2-201ENST00000567157 1104 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC19.03■□□□□ 0.64
ABCA3Q99758 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC19.03■□□□□ 0.64
ABCA3Q99758 AC233280.19-201ENST00000633223 136 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ABCA3Q99758 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ABCA3Q99758 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC19.03■□□□□ 0.64
ABCA3Q99758 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ABCA3Q99758 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC19.03■□□□□ 0.64
ABCA3Q99758 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA3Q99758 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 HNRNPA1P16-201ENST00000575692 955 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 AC006116.2-201ENST00000589958 988 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC19.03■□□□□ 0.64
ABCA3Q99758 AC104506.1-201ENST00000609247 429 ntBASIC19.03■□□□□ 0.64
ABCA3Q99758 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA3Q99758 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA3Q99758 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA3Q99758 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA3Q99758 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA3Q99758 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA3Q99758 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA3Q99758 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
ABCA3Q99758 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19.02■□□□□ 0.64
ABCA3Q99758 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.02■□□□□ 0.64
ABCA3Q99758 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.02■□□□□ 0.64
ABCA3Q99758 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ABCA3Q99758 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms