Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 TUBB8P4-201ENST00000511806 1324 ntBASIC9.91□□□□□ -0.82
LITAFQ99732 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 AL445209.1-201ENST00000607269 3491 ntBASIC9.91□□□□□ -0.82
LITAFQ99732 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
LITAFQ99732 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
LITAFQ99732 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC9.91□□□□□ -0.82
LITAFQ99732 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 AC112191.1-201ENST00000523689 701 ntBASIC9.91□□□□□ -0.82
LITAFQ99732 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 BANF1P1-201ENST00000553684 263 ntBASIC9.91□□□□□ -0.82
LITAFQ99732 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
LITAFQ99732 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC9.91□□□□□ -0.82
LITAFQ99732 MIR3652-201ENST00000579335 131 ntBASIC9.91□□□□□ -0.82
LITAFQ99732 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC9.91□□□□□ -0.82
LITAFQ99732 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC9.91□□□□□ -0.82
LITAFQ99732 FAM215A-202ENST00000632077 792 ntBASIC9.91□□□□□ -0.82
LITAFQ99732 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 AC107375.1-201ENST00000564464 2231 ntBASIC9.91□□□□□ -0.82
LITAFQ99732 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC9.91□□□□□ -0.82
LITAFQ99732 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LITAFQ99732 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC9.91□□□□□ -0.82
LITAFQ99732 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.82
LITAFQ99732 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
LITAFQ99732 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC9.9□□□□□ -0.82
LITAFQ99732 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 TNN-202ENST00000621086 4234 ntTSL 5 BASIC9.9□□□□□ -0.82
LITAFQ99732 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LITAFQ99732 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LITAFQ99732 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LITAFQ99732 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
LITAFQ99732 AL391647.1-201ENST00000395664 511 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms