Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 MEIS3P1-201ENST00000495167 958 ntBASIC13.06□□□□□ -0.32
CPNE2Q96FN4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CPNE2Q96FN4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 AC114501.2-201ENST00000439631 535 ntBASIC13.05□□□□□ -0.32
CPNE2Q96FN4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 BX640514.1-201ENST00000583223 1918 ntBASIC13.05□□□□□ -0.32
CPNE2Q96FN4 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CPNE2Q96FN4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AC055811.4-201ENST00000624039 1754 ntBASIC13.04□□□□□ -0.32
CPNE2Q96FN4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms