Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 PCDHA3-202ENST00000532566 4594 ntBASIC15.14■□□□□ 0.01
RTP4Q96DX8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 RN7SKP175-201ENST00000408472 289 ntBASIC15.14■□□□□ 0.01
RTP4Q96DX8 RPS2P32-201ENST00000439199 892 ntBASIC15.14■□□□□ 0.01
RTP4Q96DX8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 GNRHR2-203ENST00000581100 1187 ntBASIC15.14■□□□□ 0.01
RTP4Q96DX8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 AL512343.1-201ENST00000605837 169 ntBASIC15.14■□□□□ 0.01
RTP4Q96DX8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 KRT8P24-201ENST00000560290 1559 ntBASIC15.14■□□□□ 0.01
RTP4Q96DX8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 AC011498.7-201ENST00000624986 2027 ntBASIC15.14■□□□□ 0.01
RTP4Q96DX8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTP4Q96DX8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RTP4Q96DX8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 SORD2P-201ENST00000558556 1069 ntBASIC15.13■□□□□ 0.01
RTP4Q96DX8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.13■□□□□ 0.01
RTP4Q96DX8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.13■□□□□ 0.01
RTP4Q96DX8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTP4Q96DX8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.12■□□□□ 0.01
RTP4Q96DX8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms