Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 AC245100.3-201ENST00000441281 285 ntBASIC14.61□□□□□ -0.07
ATL1Q8WXF7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 RN7SL692P-201ENST00000464677 288 ntBASIC14.61□□□□□ -0.07
ATL1Q8WXF7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 AC145423.3-201ENST00000615987 467 ntBASIC14.61□□□□□ -0.07
ATL1Q8WXF7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 INTS4P1-203ENST00000641008 3683 ntBASIC14.61□□□□□ -0.07
ATL1Q8WXF7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ATL1Q8WXF7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 SALL4P5-201ENST00000419001 1760 ntBASIC14.6□□□□□ -0.07
ATL1Q8WXF7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATL1Q8WXF7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 CU639417.3-201ENST00000624240 1404 ntBASIC14.59□□□□□ -0.07
ATL1Q8WXF7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.59□□□□□ -0.07
ATL1Q8WXF7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 AC113367.3-201ENST00000508316 1912 ntBASIC14.59□□□□□ -0.07
ATL1Q8WXF7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms