Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 YBX1P6-201ENST00000442962 1002 ntBASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 AP005019.2-201ENST00000615104 511 ntBASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.45□□□□□ -0.42
SSMEM1Q8WWF3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 CSF2RBP1-201ENST00000447905 391 ntBASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.44□□□□□ -0.42
SSMEM1Q8WWF3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms