Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 AL135901.1-201ENST00000451812 333 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 PGAM1P12-201ENST00000505622 748 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 RN7SL357P-201ENST00000581065 298 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 AC073347.1-201ENST00000421633 2643 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 WASH3P-207ENST00000560956 1394 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 OR6D1P-202ENST00000641007 5290 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 RPL35P9-201ENST00000446059 350 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 AC012158.2-201ENST00000536546 354 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 AP000322.3-201ENST00000608665 388 ntBASIC17.72■□□□□ 0.43
SNED1Q8TER0 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNED1Q8TER0 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SNED1Q8TER0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 BRD7P5-201ENST00000299197 1822 ntBASIC17.71■□□□□ 0.43
SNED1Q8TER0 CICP6-201ENST00000457191 2729 ntBASIC17.71■□□□□ 0.43
SNED1Q8TER0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 AC095040.1-201ENST00000513286 675 ntBASIC17.71■□□□□ 0.43
SNED1Q8TER0 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNED1Q8TER0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.71■□□□□ 0.43
SNED1Q8TER0 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNED1Q8TER0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms