Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TTC16Q8NEE8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TTC16Q8NEE8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TTC16Q8NEE8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.73■□□□□ 0.11
TTC16Q8NEE8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TTC16Q8NEE8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.73■□□□□ 0.11
TTC16Q8NEE8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TTC16Q8NEE8 AC011270.2-201ENST00000624293 2550 ntBASIC15.73■□□□□ 0.11
TTC16Q8NEE8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TTC16Q8NEE8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.72■□□□□ 0.11
TTC16Q8NEE8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.72■□□□□ 0.11
TTC16Q8NEE8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 CD8B2-202ENST00000417670 633 ntBASIC15.72■□□□□ 0.11
TTC16Q8NEE8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TTC16Q8NEE8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 REXO1L4P-201ENST00000605109 1937 ntBASIC15.71■□□□□ 0.11
TTC16Q8NEE8 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.71■□□□□ 0.11
TTC16Q8NEE8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 HLA-K-203ENST00000430151 1046 ntBASIC15.71■□□□□ 0.11
TTC16Q8NEE8 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 KRT8P13-201ENST00000463294 1010 ntBASIC15.71■□□□□ 0.11
TTC16Q8NEE8 AC026434.2-201ENST00000506094 1078 ntBASIC15.71■□□□□ 0.11
TTC16Q8NEE8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TTC16Q8NEE8 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms