Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 AL161932.2-201ENST00000435436 679 ntBASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 SORD2P-201ENST00000558556 1069 ntBASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 FAM86B3P-203ENST00000523992 854 ntBASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC22.61■■□□□ 1.21
CFAP43Q8NDM7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 AL672207.1-201ENST00000328462 1570 ntBASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 AC018529.2-202ENST00000611482 3087 ntBASIC22.6■■□□□ 1.21
CFAP43Q8NDM7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CFAP43Q8NDM7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CFAP43Q8NDM7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CFAP43Q8NDM7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CFAP43Q8NDM7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC22.59■■□□□ 1.21
CFAP43Q8NDM7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms