Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 AC007326.2-201ENST00000624224 7579 ntBASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NANOGP1Q8N7R0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AC072061.1-201ENST00000569710 2234 ntBASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AL450487.1-201ENST00000426799 995 ntBASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 MIR4453-201ENST00000584019 89 ntBASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 TUBB3P1-201ENST00000405796 1332 ntBASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NANOGP1Q8N7R0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
NANOGP1Q8N7R0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms