Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.21■□□□□ 0.19
VPS52Q8N1B4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 AC044849.1-201ENST00000519737 1188 ntBASIC16.21■□□□□ 0.19
VPS52Q8N1B4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 AP003171.2-201ENST00000528208 925 ntBASIC16.21■□□□□ 0.19
VPS52Q8N1B4 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.21■□□□□ 0.19
VPS52Q8N1B4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS52Q8N1B4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS52Q8N1B4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VPS52Q8N1B4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
VPS52Q8N1B4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS52Q8N1B4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS52Q8N1B4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
VPS52Q8N1B4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VPS52Q8N1B4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS52Q8N1B4 HIST2H2BB-201ENST00000449108 381 ntBASIC16.2■□□□□ 0.18
VPS52Q8N1B4 UPF3AP2-201ENST00000457924 1132 ntBASIC16.2■□□□□ 0.18
VPS52Q8N1B4 SERPINA13P-202ENST00000478994 924 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms