Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 AC092570.1-201ENST00000414446 469 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 FDPSP7-201ENST00000429043 1054 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 KRT18P46-201ENST00000435568 1279 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 IGHEP1-201ENST00000521393 651 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 AC021305.1-201ENST00000520656 1514 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 OR5BD1P-201ENST00000532527 817 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 AP000769.1-203ENST00000637245 208 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 AC087481.3-201ENST00000602886 1894 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AL365203.3-201ENST00000609742 2057 ntBASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 CCL25-202ENST00000315626 450 ntTSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 HLA-DPA2-205ENST00000433582 733 ntBASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AC092896.1-201ENST00000465850 380 ntBASIC10.07□□□□□ -0.8
CSMD3Q7Z407 RN7SL277P-201ENST00000481521 288 ntBASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 EMC4-208ENST00000559078 599 ntTSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PRMT1P1-201ENST00000604252 1009 ntBASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AC010976.2-201ENST00000609697 852 ntBASIC10.07□□□□□ -0.8
CSMD3Q7Z407 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PPP1R2P4-201ENST00000424051 595 ntBASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PFN2-212ENST00000490975 858 ntTSL 4 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms