Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
FAM78BQ5VT40 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 RPSAP43-201ENST00000402237 625 ntBASIC11.93□□□□□ -0.5
FAM78BQ5VT40 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 KRT18P32-201ENST00000424695 1287 ntBASIC11.93□□□□□ -0.5
FAM78BQ5VT40 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 SLED1-202ENST00000512051 380 ntBASIC11.93□□□□□ -0.5
FAM78BQ5VT40 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 AC105021.1-202ENST00000570572 669 ntBASIC11.93□□□□□ -0.5
FAM78BQ5VT40 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 AL513210.1-201ENST00000629608 234 ntBASIC11.93□□□□□ -0.5
FAM78BQ5VT40 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 AC084121.4-201ENST00000641598 221 ntBASIC11.93□□□□□ -0.5
FAM78BQ5VT40 AF228730.8-201ENST00000642140 221 ntBASIC11.93□□□□□ -0.5
FAM78BQ5VT40 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
FAM78BQ5VT40 NUTM2HP-201ENST00000442076 2498 ntBASIC11.93□□□□□ -0.5
FAM78BQ5VT40 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.92□□□□□ -0.5
FAM78BQ5VT40 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
FAM78BQ5VT40 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms