Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 RN7SL788P-201ENST00000460504 316 ntBASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 AC083801.1-201ENST00000491689 358 ntBASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 ODCP-201ENST00000459650 1639 ntBASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 PDXDC2P-206ENST00000534700 1315 ntBASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 HNRNPA1P2-207ENST00000432375 960 ntBASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 SERBP1P2-201ENST00000436888 1164 ntBASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 COX5A-205ENST00000568517 582 ntTSL 3 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 PRMT1P1-201ENST00000604252 1009 ntBASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13DQ5THJ4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 NT5C-204ENST00000578337 582 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 AP000322.3-201ENST00000608665 388 ntBASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 AC132872.4-202ENST00000622924 2756 ntBASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13DQ5THJ4 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ABHD17AP9-201ENST00000561925 548 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 OR7E115P-201ENST00000382617 1024 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ALG1L7P-201ENST00000502317 768 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 EEF1GP8-201ENST00000506566 1154 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 AC004686.1-201ENST00000605113 538 ntBASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13DQ5THJ4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms