Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC116165.1-201ENST00000611806 668 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC004790.1-201ENST00000612686 536 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AL645728.2-202ENST00000641679 227 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 SLC7A15P-201ENST00000424028 1363 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC018442.1-201ENST00000421439 2061 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 MST1P2-201ENST00000457982 2291 ntBASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
ATPAF1Q5TC12 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 AC236430.1-201ENST00000402231 743 ntBASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 PIN1P1-201ENST00000412108 996 ntBASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 GHSR-202ENST00000427970 912 ntBASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 GNAQP1-201ENST00000444815 1067 ntBASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 RN7SL399P-201ENST00000471648 279 ntBASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 AC036164.1-201ENST00000570544 333 ntBASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 AC004233.3-201ENST00000607794 1269 ntBASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATPAF1Q5TC12 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms