| FOXC1 | Q12948 | RGR-203 | ENST00000372092 | 868 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | ZNF286A-201 | ENST00000395893 | 654 nt | TSL 3 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | RPS27L-202 | ENST00000411926 | 528 nt | TSL 3 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | HNRNPA1P27-201 | ENST00000412087 | 955 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | Z95624.1-201 | ENST00000413528 | 628 nt | TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | CCL24-202 | ENST00000416943 | 585 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | CXorf40A-205 | ENST00000423540 | 1208 nt | APPRIS P3 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AL929302.1-201 | ENST00000426556 | 871 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AC006372.2-201 | ENST00000433660 | 292 nt | TSL 3 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | OR2R1P-201 | ENST00000441404 | 914 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | RPL3P5-201 | ENST00000441645 | 1232 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AC023906.1-201 | ENST00000486386 | 453 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AC055748.1-201 | ENST00000489836 | 959 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AC112487.1-201 | ENST00000498032 | 1097 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | TSPAN5-202 | ENST00000505184 | 1191 nt | TSL 2 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | NR4A1-209 | ENST00000548232 | 1101 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | ANAPC11-206 | ENST00000571874 | 636 nt | APPRIS P1 TSL 2 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AC139099.2-201 | ENST00000572343 | 641 nt | TSL 3 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | SIGLEC22P-201 | ENST00000599104 | 714 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | RPL18A-204 | ENST00000599898 | 491 nt | TSL 2 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AC008972.2-201 | ENST00000606587 | 494 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | Metazoa_SRP.127-201 | ENST00000614914 | 302 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AL157762.1-201 | ENST00000619612 | 415 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | SLC12A5-219 | ENST00000628272 | 401 nt | TSL 3 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | PROX1-AS1-235 | ENST00000628896 | 711 nt | TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | CCNH-201 | ENST00000256897 | 1378 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | SLC4A3-204 | ENST00000373760 | 4134 nt | APPRIS P1 TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AL109809.1-201 | ENST00000418979 | 1367 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | CCL5-201 | ENST00000603197 | 1365 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AC025183.3-201 | ENST00000623526 | 1482 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | GJB1-203 | ENST00000374029 | 1587 nt | APPRIS P1 TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | CCDC51-201 | ENST00000395694 | 1560 nt | APPRIS P1 TSL 2 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | CD1E-206 | ENST00000368161 | 1689 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | ZMYND10-202 | ENST00000360165 | 1757 nt | APPRIS ALT1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | SLC3A2-203 | ENST00000377890 | 2161 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | PCDHA10-201 | ENST00000307360 | 5254 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | AC006460.2-201 | ENST00000638173 | 4744 nt | TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | FBXL3-201 | ENST00000355619 | 3503 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | SLC9A7P1-202 | ENST00000556476 | 2239 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | LEKR1-209 | ENST00000491763 | 1940 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | FBXL21-202 | ENST00000467490 | 1742 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| FOXC1 | Q12948 | TXNDC9-201 | ENST00000264255 | 1637 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | SEC14L4-204 | ENST00000381982 | 1603 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | RDX-201 | ENST00000343115 | 4491 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | CCNG2-202 | ENST00000395640 | 1410 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | ATF4-202 | ENST00000396680 | 1419 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | ABCG5-202 | ENST00000405322 | 2896 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | STRN3-202 | ENST00000357479 | 2799 nt | APPRIS P1 TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | KCNMA1-261 | ENST00000639486 | 8850 nt | APPRIS ALT2 TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | RSRP1-202 | ENST00000431849 | 1954 nt | APPRIS ALT2 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | CTSB-232 | ENST00000534510 | 1989 nt | APPRIS P1 TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AK4-202 | ENST00000395334 | 6998 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | SALL4P5-201 | ENST00000419001 | 1760 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | LDLRAP1-201 | ENST00000374338 | 2940 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | EPS8-201 | ENST00000281172 | 4061 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | FAM213B-205 | ENST00000444521 | 2827 nt | APPRIS ALT2 TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | EIF2B3-201 | ENST00000360403 | 1659 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | ASB15-207 | ENST00000540573 | 1651 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | PAIP2-201 | ENST00000265192 | 1459 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | KRT8-217 | ENST00000619952 | 2437 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | NEK3-206 | ENST00000611833 | 2345 nt | APPRIS ALT2 TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AQP6-204 | ENST00000615425 | 2245 nt | APPRIS P1 TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AC211486.1-201 | ENST00000275590 | 980 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | KCNE1-203 | ENST00000399286 | 1204 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AL512622.1-202 | ENST00000443922 | 478 nt | TSL 3 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | LAMA4-209 | ENST00000453937 | 645 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | MYL7-209 | ENST00000458240 | 791 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | RPL12P24-201 | ENST00000474907 | 486 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | RN7SL277P-201 | ENST00000481521 | 288 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | NPM1P28-201 | ENST00000492269 | 840 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AC008026.2-201 | ENST00000495438 | 348 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | ALG1L3P-201 | ENST00000503331 | 765 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | CHCHD2P2-201 | ENST00000503744 | 321 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AC025524.2-206 | ENST00000517953 | 439 nt | TSL 3 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | GLIPR1L1-204 | ENST00000548623 | 484 nt | TSL 3 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AC125603.3-201 | ENST00000550742 | 486 nt | TSL 3 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | NACA-221 | ENST00000552540 | 1074 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AC016266.1-201 | ENST00000557558 | 729 nt | TSL 3 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AC018846.1-201 | ENST00000568231 | 183 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AC023389.1-201 | ENST00000577846 | 576 nt | TSL 4 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | C19orf70-203 | ENST00000587589 | 577 nt | TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | LINC02333-201 | ENST00000603464 | 852 nt | TSL 3 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AC009118.3-201 | ENST00000622896 | 873 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AP000357.2-201 | ENST00000633827 | 597 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | ITSN1-209 | ENST00000399352 | 5408 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | GNS-201 | ENST00000258145 | 5122 nt | APPRIS P2 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | SIRT1-201 | ENST00000212015 | 4094 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | RBM4B-201 | ENST00000310046 | 1840 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | HNRNPR-212 | ENST00000606561 | 1837 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | GOSR2-211 | ENST00000623037 | 1814 nt | TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | GIMAP1-201 | ENST00000307194 | 4420 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | COLEC11-203 | ENST00000382062 | 1633 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | EIF2B4-206 | ENST00000451130 | 1633 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | FOS-201 | ENST00000303562 | 2158 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | AC021148.1-201 | ENST00000513652 | 1532 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | MRPL55-205 | ENST00000366731 | 1423 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | SPDEF-202 | ENST00000544425 | 1866 nt | APPRIS ALT1 TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | XKR9-203 | ENST00000520030 | 1799 nt | APPRIS P1 TSL 1 (best) BASIC | 13.88 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | FAM53A-207 | ENST00000489363 | 2776 nt | TSL 2 BASIC | 13.88 | □□□□□ -0.19 | | |
| FOXC1 | Q12948 | HSD3B7-201 | ENST00000262520 | 2200 nt | TSL 2 BASIC | 13.88 | □□□□□ -0.19 | | |