Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 IGHJ2P-201ENST00000454480 60 ntBASIC17.11■□□□□ 0.33
CHMP4BP1P59074 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 AL021578.1-201ENST00000613646 709 ntBASIC17.11■□□□□ 0.33
CHMP4BP1P59074 AL008638.5-201ENST00000623814 1298 ntBASIC17.11■□□□□ 0.33
CHMP4BP1P59074 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP4BP1P59074 AL158070.2-201ENST00000623713 1621 ntBASIC17.1■□□□□ 0.33
CHMP4BP1P59074 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 AL365209.1-201ENST00000624418 6473 ntBASIC17.1■□□□□ 0.33
CHMP4BP1P59074 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 AC004945.1-201ENST00000416738 983 ntBASIC17.1■□□□□ 0.33
CHMP4BP1P59074 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 AL591846.1-201ENST00000451736 433 ntBASIC17.1■□□□□ 0.33
CHMP4BP1P59074 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 RPSAP36-202ENST00000494591 1261 ntBASIC17.1■□□□□ 0.33
CHMP4BP1P59074 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.1■□□□□ 0.33
CHMP4BP1P59074 AL096828.3-201ENST00000615354 462 ntBASIC17.1■□□□□ 0.33
CHMP4BP1P59074 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.1■□□□□ 0.33
CHMP4BP1P59074 AC127383.1-201ENST00000444697 1800 ntBASIC17.1■□□□□ 0.33
CHMP4BP1P59074 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms