Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNQ4P56696 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KCNQ4P56696 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNQ4P56696 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNQ4P56696 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNQ4P56696 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNQ4P56696 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNQ4P56696 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
KCNQ4P56696 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KCNQ4P56696 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KCNQ4P56696 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNQ4P56696 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.64■□□□□ 0.57
KCNQ4P56696 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
KCNQ4P56696 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNQ4P56696 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 RPL35P9-201ENST00000446059 350 ntBASIC18.64■□□□□ 0.57
KCNQ4P56696 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.64■□□□□ 0.57
KCNQ4P56696 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.64■□□□□ 0.57
KCNQ4P56696 KRT8P1-201ENST00000557533 1207 ntBASIC18.64■□□□□ 0.57
KCNQ4P56696 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNQ4P56696 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNQ4P56696 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
KCNQ4P56696 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNQ4P56696 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNQ4P56696 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNQ4P56696 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNQ4P56696 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.63■□□□□ 0.57
KCNQ4P56696 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNQ4P56696 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.63■□□□□ 0.57
KCNQ4P56696 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC18.63■□□□□ 0.57
KCNQ4P56696 RNA5SP406-201ENST00000516106 112 ntBASIC18.63■□□□□ 0.57
KCNQ4P56696 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.63■□□□□ 0.57
KCNQ4P56696 AC226150.1-201ENST00000544259 466 ntBASIC18.63■□□□□ 0.57
KCNQ4P56696 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.63■□□□□ 0.57
KCNQ4P56696 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.63■□□□□ 0.57
KCNQ4P56696 AC140113.1-201ENST00000603467 169 ntBASIC18.63■□□□□ 0.57
KCNQ4P56696 MME-218ENST00000625667 363 ntTSL 5 BASIC18.63■□□□□ 0.57
KCNQ4P56696 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.63■□□□□ 0.57
KCNQ4P56696 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNQ4P56696 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
KCNQ4P56696 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.63■□□□□ 0.57
KCNQ4P56696 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.63■□□□□ 0.57
KCNQ4P56696 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNQ4P56696 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
KCNQ4P56696 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.62■□□□□ 0.57
KCNQ4P56696 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.62■□□□□ 0.57
KCNQ4P56696 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNQ4P56696 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNQ4P56696 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNQ4P56696 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNQ4P56696 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.62■□□□□ 0.57
KCNQ4P56696 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNQ4P56696 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNQ4P56696 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNQ4P56696 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.62■□□□□ 0.57
KCNQ4P56696 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC18.62■□□□□ 0.57
KCNQ4P56696 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.62■□□□□ 0.57
KCNQ4P56696 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.62■□□□□ 0.57
KCNQ4P56696 OR5BD1P-201ENST00000532527 817 ntBASIC18.62■□□□□ 0.57
KCNQ4P56696 ABHD17AP9-201ENST00000561925 548 ntBASIC18.62■□□□□ 0.57
KCNQ4P56696 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.62■□□□□ 0.57
KCNQ4P56696 AC124068.2-201ENST00000569473 1109 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms