Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDH13P55290 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 AC012617.1-204ENST00000586340 2305 ntBASIC14.63□□□□□ -0.07
CDH13P55290 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDH13P55290 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDH13P55290 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH13P55290 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 UGT1A2P-201ENST00000454886 866 ntBASIC14.63□□□□□ -0.07
CDH13P55290 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH13P55290 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH13P55290 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH13P55290 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.63□□□□□ -0.07
CDH13P55290 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH13P55290 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH13P55290 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH13P55290 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH13P55290 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH13P55290 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH13P55290 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH13P55290 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH13P55290 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 AC092135.3-201ENST00000624151 1846 ntBASIC14.63□□□□□ -0.07
CDH13P55290 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 KRT8P22-201ENST00000562317 1415 ntBASIC14.63□□□□□ -0.07
CDH13P55290 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDH13P55290 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDH13P55290 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH13P55290 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH13P55290 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH13P55290 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH13P55290 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
CDH13P55290 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CDH13P55290 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH13P55290 AC098850.1-201ENST00000419919 790 ntBASIC14.62□□□□□ -0.07
CDH13P55290 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 AC093004.1-201ENST00000508850 424 ntBASIC14.62□□□□□ -0.07
CDH13P55290 AC022616.1-201ENST00000518688 554 ntBASIC14.62□□□□□ -0.07
CDH13P55290 AC055876.2-201ENST00000531834 546 ntBASIC14.62□□□□□ -0.07
CDH13P55290 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH13P55290 AC124283.3-201ENST00000570869 594 ntBASIC14.62□□□□□ -0.07
CDH13P55290 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH13P55290 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH13P55290 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.62□□□□□ -0.07
CDH13P55290 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH13P55290 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 AC008761.3-201ENST00000624803 892 ntBASIC14.62□□□□□ -0.07
CDH13P55290 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDH13P55290 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH13P55290 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH13P55290 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms