Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 CICP4-201ENST00000447359 2812 ntBASIC13.94□□□□□ -0.18
PSMD4P55036 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.94□□□□□ -0.18
PSMD4P55036 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.94□□□□□ -0.18
PSMD4P55036 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.94□□□□□ -0.18
PSMD4P55036 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.94□□□□□ -0.18
PSMD4P55036 C2orf27AP3-201ENST00000434123 579 ntBASIC13.94□□□□□ -0.18
PSMD4P55036 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
PSMD4P55036 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.94□□□□□ -0.18
PSMD4P55036 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.94□□□□□ -0.18
PSMD4P55036 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.94□□□□□ -0.18
PSMD4P55036 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PSMD4P55036 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.94□□□□□ -0.18
PSMD4P55036 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.94□□□□□ -0.18
PSMD4P55036 AL354718.3-201ENST00000616414 581 ntBASIC13.94□□□□□ -0.18
PSMD4P55036 CR382287.1-201ENST00000623954 586 ntBASIC13.94□□□□□ -0.18
PSMD4P55036 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.94□□□□□ -0.18
PSMD4P55036 AC105233.6-201ENST00000642093 218 ntBASIC13.94□□□□□ -0.18
PSMD4P55036 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PSMD4P55036 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.94□□□□□ -0.18
PSMD4P55036 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.93□□□□□ -0.18
PSMD4P55036 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.93□□□□□ -0.18
PSMD4P55036 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.93□□□□□ -0.18
PSMD4P55036 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PSMD4P55036 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PSMD4P55036 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PSMD4P55036 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PSMD4P55036 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.93□□□□□ -0.18
PSMD4P55036 AL035633.1-201ENST00000406139 838 ntBASIC13.93□□□□□ -0.18
PSMD4P55036 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.93□□□□□ -0.18
PSMD4P55036 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.93□□□□□ -0.18
PSMD4P55036 COX5BP8-201ENST00000416911 349 ntBASIC13.93□□□□□ -0.18
PSMD4P55036 NME2P1-201ENST00000426182 414 ntBASIC13.93□□□□□ -0.18
PSMD4P55036 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
PSMD4P55036 KRT43P-201ENST00000434019 910 ntBASIC13.93□□□□□ -0.18
PSMD4P55036 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.93□□□□□ -0.18
PSMD4P55036 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.93□□□□□ -0.18
PSMD4P55036 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.93□□□□□ -0.18
PSMD4P55036 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.93□□□□□ -0.18
PSMD4P55036 AC005225.4-201ENST00000557330 545 ntBASIC13.93□□□□□ -0.18
PSMD4P55036 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.93□□□□□ -0.18
PSMD4P55036 RN7SL48P-201ENST00000579283 293 ntBASIC13.93□□□□□ -0.18
PSMD4P55036 AC233724.13-201ENST00000598383 410 ntBASIC13.93□□□□□ -0.18
PSMD4P55036 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.93□□□□□ -0.18
PSMD4P55036 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms