Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.25□□□□□ -0.29
LHX2P50458 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.25□□□□□ -0.29
LHX2P50458 AC005740.2-201ENST00000511085 419 ntBASIC13.25□□□□□ -0.29
LHX2P50458 SCARNA20.5-201ENST00000516991 142 ntBASIC13.25□□□□□ -0.29
LHX2P50458 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
LHX2P50458 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.25□□□□□ -0.29
LHX2P50458 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.25□□□□□ -0.29
LHX2P50458 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.25□□□□□ -0.29
LHX2P50458 Z98259.2-201ENST00000641583 609 ntBASIC13.25□□□□□ -0.29
LHX2P50458 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.25□□□□□ -0.29
LHX2P50458 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LHX2P50458 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.25□□□□□ -0.29
LHX2P50458 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
LHX2P50458 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LHX2P50458 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
LHX2P50458 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 AL133338.1-201ENST00000565695 1517 ntBASIC13.24□□□□□ -0.29
LHX2P50458 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LHX2P50458 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 AL008718.2-201ENST00000609206 1313 ntBASIC13.24□□□□□ -0.29
LHX2P50458 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.24□□□□□ -0.29
LHX2P50458 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.24□□□□□ -0.29
LHX2P50458 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LHX2P50458 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LHX2P50458 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.24□□□□□ -0.29
LHX2P50458 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.24□□□□□ -0.29
LHX2P50458 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.24□□□□□ -0.29
LHX2P50458 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.24□□□□□ -0.29
LHX2P50458 AL157407.1-201ENST00000435784 904 ntBASIC13.24□□□□□ -0.29
LHX2P50458 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.24□□□□□ -0.29
LHX2P50458 AC106794.1-201ENST00000506935 792 ntBASIC13.24□□□□□ -0.29
LHX2P50458 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.24□□□□□ -0.29
LHX2P50458 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
LHX2P50458 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.24□□□□□ -0.29
LHX2P50458 RN7SL163P-201ENST00000583100 276 ntBASIC13.24□□□□□ -0.29
LHX2P50458 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 AC009884.2-201ENST00000603110 324 ntBASIC13.24□□□□□ -0.29
LHX2P50458 AC138649.2-201ENST00000615886 705 ntBASIC13.24□□□□□ -0.29
LHX2P50458 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
LHX2P50458 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.24□□□□□ -0.29
LHX2P50458 FGD5P1-202ENST00000614866 2498 ntBASIC13.24□□□□□ -0.29
LHX2P50458 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.24□□□□□ -0.29
LHX2P50458 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LHX2P50458 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
LHX2P50458 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LHX2P50458 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.23□□□□□ -0.29
LHX2P50458 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LHX2P50458 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms