Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLC6A12P48065 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC6A12P48065 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SLC6A12P48065 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 RN7SL713P-201ENST00000582127 302 ntBASIC14.33□□□□□ -0.12
SLC6A12P48065 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 AC073413.1-201ENST00000603927 732 ntBASIC14.33□□□□□ -0.12
SLC6A12P48065 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 AC002472.3-201ENST00000640124 621 ntBASIC14.33□□□□□ -0.12
SLC6A12P48065 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
SLC6A12P48065 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLC6A12P48065 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC6A12P48065 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SLC6A12P48065 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC6A12P48065 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
SLC6A12P48065 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC6A12P48065 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
SLC6A12P48065 KRT43P-201ENST00000434019 910 ntBASIC14.32□□□□□ -0.12
SLC6A12P48065 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC6A12P48065 AP000812.2-201ENST00000538934 718 ntBASIC14.32□□□□□ -0.12
SLC6A12P48065 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.32□□□□□ -0.12
SLC6A12P48065 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 MIR4683-201ENST00000579659 81 ntBASIC14.32□□□□□ -0.12
SLC6A12P48065 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 AC012645.4-201ENST00000610691 1061 ntBASIC14.32□□□□□ -0.12
SLC6A12P48065 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SLC6A12P48065 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
SLC6A12P48065 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC6A12P48065 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC6A12P48065 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC6A12P48065 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 AL354989.2-201ENST00000435838 1540 ntBASIC14.31□□□□□ -0.12
SLC6A12P48065 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC6A12P48065 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms