Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-1P43699 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX2-1P43699 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-1P43699 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
NKX2-1P43699 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.28□□□□□ -0.44
NKX2-1P43699 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX2-1P43699 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
NKX2-1P43699 AC092902.6-201ENST00000641783 218 ntBASIC12.28□□□□□ -0.44
NKX2-1P43699 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NKX2-1P43699 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-1P43699 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-1P43699 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX2-1P43699 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-1P43699 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-1P43699 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-1P43699 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-1P43699 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NKX2-1P43699 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX2-1P43699 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX2-1P43699 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-1P43699 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.27□□□□□ -0.44
NKX2-1P43699 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.27□□□□□ -0.44
NKX2-1P43699 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
NKX2-1P43699 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
NKX2-1P43699 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.27□□□□□ -0.44
NKX2-1P43699 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
NKX2-1P43699 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.27□□□□□ -0.44
NKX2-1P43699 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NKX2-1P43699 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
NKX2-1P43699 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX2-1P43699 AC015922.1-201ENST00000421102 1152 ntBASIC12.27□□□□□ -0.45
NKX2-1P43699 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.27□□□□□ -0.45
NKX2-1P43699 KRT18P64-201ENST00000434946 1219 ntBASIC12.27□□□□□ -0.45
NKX2-1P43699 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX2-1P43699 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
NKX2-1P43699 TIMM8BP1-201ENST00000452384 211 ntBASIC12.27□□□□□ -0.45
NKX2-1P43699 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
NKX2-1P43699 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.27□□□□□ -0.45
NKX2-1P43699 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX2-1P43699 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
NKX2-1P43699 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.27□□□□□ -0.45
NKX2-1P43699 KRT18P58-201ENST00000527480 1120 ntBASIC12.27□□□□□ -0.45
NKX2-1P43699 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.27□□□□□ -0.45
NKX2-1P43699 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.27□□□□□ -0.45
NKX2-1P43699 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.27□□□□□ -0.45
NKX2-1P43699 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.27□□□□□ -0.45
NKX2-1P43699 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 AC004899.2-201ENST00000622993 3860 ntBASIC12.27□□□□□ -0.45
NKX2-1P43699 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
NKX2-1P43699 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX2-1P43699 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
NKX2-1P43699 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
NKX2-1P43699 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
NKX2-1P43699 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NKX2-1P43699 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.27□□□□□ -0.45
NKX2-1P43699 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX2-1P43699 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX2-1P43699 AL121723.1-201ENST00000445194 1519 ntBASIC12.27□□□□□ -0.45
NKX2-1P43699 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NKX2-1P43699 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NKX2-1P43699 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 Z97205.2-201ENST00000564697 1639 ntBASIC12.26□□□□□ -0.45
NKX2-1P43699 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms