Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM23P36406 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM23P36406 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM23P36406 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.63□□□□□ -0.07
TRIM23P36406 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM23P36406 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRIM23P36406 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TRIM23P36406 AC013726.1-201ENST00000563747 2285 ntBASIC14.63□□□□□ -0.07
TRIM23P36406 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM23P36406 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRIM23P36406 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
TRIM23P36406 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRIM23P36406 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM23P36406 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM23P36406 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRIM23P36406 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM23P36406 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM23P36406 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.63□□□□□ -0.07
TRIM23P36406 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRIM23P36406 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRIM23P36406 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 AC016700.1-201ENST00000429424 312 ntBASIC14.62□□□□□ -0.07
TRIM23P36406 FNTAP2-201ENST00000430308 634 ntBASIC14.62□□□□□ -0.07
TRIM23P36406 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 KLF2P1-201ENST00000447438 1042 ntBASIC14.62□□□□□ -0.07
TRIM23P36406 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 AC005740.2-201ENST00000511085 419 ntBASIC14.62□□□□□ -0.07
TRIM23P36406 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.62□□□□□ -0.07
TRIM23P36406 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM23P36406 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM23P36406 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.62□□□□□ -0.07
TRIM23P36406 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM23P36406 Z98259.2-201ENST00000641583 609 ntBASIC14.62□□□□□ -0.07
TRIM23P36406 AC063926.3-201ENST00000624734 5658 ntBASIC14.62□□□□□ -0.07
TRIM23P36406 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM23P36406 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 AC092135.3-201ENST00000624151 1846 ntBASIC14.62□□□□□ -0.07
TRIM23P36406 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM23P36406 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM23P36406 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM23P36406 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRIM23P36406 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM23P36406 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM23P36406 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM23P36406 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.61□□□□□ -0.07
TRIM23P36406 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM23P36406 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM23P36406 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM23P36406 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM23P36406 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 MIR6720-201ENST00000611664 98 ntBASIC14.61□□□□□ -0.07
TRIM23P36406 AC138649.2-201ENST00000615886 705 ntBASIC14.61□□□□□ -0.07
TRIM23P36406 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM23P36406 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM23P36406 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms