Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.03■□□□□ 0.32
CLCN1P35523 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.03■□□□□ 0.32
CLCN1P35523 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 AC097359.3-201ENST00000603982 1210 ntBASIC17.03■□□□□ 0.32
CLCN1P35523 RN7SL828P-201ENST00000607615 303 ntBASIC17.03■□□□□ 0.32
CLCN1P35523 AC007967.4-201ENST00000614700 386 ntBASIC17.03■□□□□ 0.32
CLCN1P35523 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN1P35523 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN1P35523 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN1P35523 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN1P35523 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.02■□□□□ 0.32
CLCN1P35523 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLCN1P35523 KRT18P13-201ENST00000400056 1290 ntBASIC17.02■□□□□ 0.32
CLCN1P35523 AZGP1P1-201ENST00000411909 902 ntBASIC17.02■□□□□ 0.32
CLCN1P35523 SPDYE17-201ENST00000412399 783 ntBASIC17.02■□□□□ 0.32
CLCN1P35523 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.02■□□□□ 0.32
CLCN1P35523 DNAJB3-202ENST00000449667 1266 ntBASIC17.02■□□□□ 0.32
CLCN1P35523 AC004967.1-201ENST00000453589 447 ntBASIC17.02■□□□□ 0.32
CLCN1P35523 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.02■□□□□ 0.32
CLCN1P35523 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.02■□□□□ 0.32
CLCN1P35523 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 AL512356.2-201ENST00000546955 174 ntBASIC17.02■□□□□ 0.32
CLCN1P35523 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN1P35523 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN1P35523 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 AL596442.2-201ENST00000610240 980 ntBASIC17.02■□□□□ 0.32
CLCN1P35523 AC011700.1-201ENST00000610409 2627 ntBASIC17.02■□□□□ 0.32
CLCN1P35523 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN1P35523 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC17.02■□□□□ 0.31
CLCN1P35523 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC17.02■□□□□ 0.31
CLCN1P35523 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLCN1P35523 TNN-202ENST00000621086 4234 ntTSL 5 BASIC17.02■□□□□ 0.31
CLCN1P35523 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLCN1P35523 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCN1P35523 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCN1P35523 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCN1P35523 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLCN1P35523 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CLCN1P35523 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLCN1P35523 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 AL365181.3-201ENST00000605886 3222 ntBASIC17.01■□□□□ 0.31
CLCN1P35523 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLCN1P35523 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CLCN1P35523 HIST3H2BA-201ENST00000436555 524 ntBASIC17.01■□□□□ 0.31
CLCN1P35523 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.01■□□□□ 0.31
CLCN1P35523 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.01■□□□□ 0.31
CLCN1P35523 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCN1P35523 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CLCN1P35523 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms