Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RFC4P35249 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.46■□□□□ 0.54
RFC4P35249 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.46■□□□□ 0.54
RFC4P35249 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RFC4P35249 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.46■□□□□ 0.54
RFC4P35249 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.45■□□□□ 0.54
RFC4P35249 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.45■□□□□ 0.54
RFC4P35249 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.45■□□□□ 0.54
RFC4P35249 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 KRT8P28-201ENST00000433288 1390 ntBASIC18.45■□□□□ 0.54
RFC4P35249 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RFC4P35249 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
RFC4P35249 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RFC4P35249 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.45■□□□□ 0.54
RFC4P35249 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.45■□□□□ 0.54
RFC4P35249 KRT8P1-201ENST00000557533 1207 ntBASIC18.45■□□□□ 0.54
RFC4P35249 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
RFC4P35249 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.45■□□□□ 0.54
RFC4P35249 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RFC4P35249 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 AL118508.1-201ENST00000613502 2345 ntBASIC18.45■□□□□ 0.54
RFC4P35249 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
RFC4P35249 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.45■□□□□ 0.54
RFC4P35249 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFC4P35249 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.44■□□□□ 0.54
RFC4P35249 AC023024.2-201ENST00000623561 1993 ntBASIC18.44■□□□□ 0.54
RFC4P35249 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RFC4P35249 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.44■□□□□ 0.54
RFC4P35249 AL512306.1-201ENST00000432698 848 ntBASIC18.44■□□□□ 0.54
RFC4P35249 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.44■□□□□ 0.54
RFC4P35249 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.44■□□□□ 0.54
RFC4P35249 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.44■□□□□ 0.54
RFC4P35249 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.44■□□□□ 0.54
RFC4P35249 AC124068.2-201ENST00000569473 1109 ntBASIC18.44■□□□□ 0.54
RFC4P35249 AC011247.3-201ENST00000603297 438 ntBASIC18.44■□□□□ 0.54
RFC4P35249 AC073592.2-201ENST00000623062 780 ntBASIC18.44■□□□□ 0.54
RFC4P35249 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.44■□□□□ 0.54
RFC4P35249 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFC4P35249 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RFC4P35249 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 AL136172.1-201ENST00000598590 1394 ntBASIC18.43■□□□□ 0.54
RFC4P35249 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RFC4P35249 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.43■□□□□ 0.54
RFC4P35249 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.43■□□□□ 0.54
RFC4P35249 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RFC4P35249 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.43■□□□□ 0.54
RFC4P35249 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.43■□□□□ 0.54
RFC4P35249 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RFC4P35249 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.43■□□□□ 0.54
RFC4P35249 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.43■□□□□ 0.54
RFC4P35249 AC073869.2-201ENST00000417338 1026 ntBASIC18.43■□□□□ 0.54
RFC4P35249 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.43■□□□□ 0.54
RFC4P35249 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.43■□□□□ 0.54
RFC4P35249 DNM1P51-201ENST00000558149 522 ntBASIC18.43■□□□□ 0.54
RFC4P35249 RN7SL596P-201ENST00000582123 288 ntBASIC18.43■□□□□ 0.54
RFC4P35249 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.43■□□□□ 0.54
RFC4P35249 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.43■□□□□ 0.54
RFC4P35249 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
RFC4P35249 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFC4P35249 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms