Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.6□□□□□ -0.39
COL8A2P25067 POM121L10P-201ENST00000436994 1285 ntBASIC12.6□□□□□ -0.39
COL8A2P25067 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.6□□□□□ -0.39
COL8A2P25067 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.6□□□□□ -0.39
COL8A2P25067 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.6□□□□□ -0.39
COL8A2P25067 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.6□□□□□ -0.39
COL8A2P25067 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.6□□□□□ -0.39
COL8A2P25067 AC138696.2-201ENST00000607376 223 ntBASIC12.6□□□□□ -0.39
COL8A2P25067 AL358472.3-201ENST00000608147 415 ntBASIC12.6□□□□□ -0.39
COL8A2P25067 AL136301.1-201ENST00000615830 422 ntBASIC12.6□□□□□ -0.39
COL8A2P25067 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.6□□□□□ -0.39
COL8A2P25067 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 AC002472.3-201ENST00000640124 621 ntBASIC12.6□□□□□ -0.39
COL8A2P25067 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
COL8A2P25067 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COL8A2P25067 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.6□□□□□ -0.39
COL8A2P25067 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.6□□□□□ -0.39
COL8A2P25067 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.6□□□□□ -0.39
COL8A2P25067 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
COL8A2P25067 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COL8A2P25067 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COL8A2P25067 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.6□□□□□ -0.39
COL8A2P25067 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 AC063926.3-201ENST00000624734 5658 ntBASIC12.59□□□□□ -0.39
COL8A2P25067 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 AL133338.1-201ENST00000565695 1517 ntBASIC12.59□□□□□ -0.39
COL8A2P25067 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
COL8A2P25067 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 AC006058.4-201ENST00000624016 1670 ntBASIC12.59□□□□□ -0.39
COL8A2P25067 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.59□□□□□ -0.39
COL8A2P25067 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.59□□□□□ -0.39
COL8A2P25067 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.59□□□□□ -0.39
COL8A2P25067 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.59□□□□□ -0.39
COL8A2P25067 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.59□□□□□ -0.39
COL8A2P25067 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 AC007663.3-201ENST00000609632 465 ntBASIC12.59□□□□□ -0.39
COL8A2P25067 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.59□□□□□ -0.39
COL8A2P25067 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.59□□□□□ -0.39
COL8A2P25067 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.59□□□□□ -0.39
COL8A2P25067 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COL8A2P25067 AL138725.1-201ENST00000407347 1314 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms