Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.22□□□□□ -0.29
MSR1P21757 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.22□□□□□ -0.29
MSR1P21757 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.22□□□□□ -0.29
MSR1P21757 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MSR1P21757 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
MSR1P21757 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.22□□□□□ -0.29
MSR1P21757 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MSR1P21757 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MSR1P21757 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MSR1P21757 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MSR1P21757 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.22□□□□□ -0.29
MSR1P21757 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.22□□□□□ -0.29
MSR1P21757 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.21□□□□□ -0.29
MSR1P21757 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.21□□□□□ -0.29
MSR1P21757 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
MSR1P21757 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.21□□□□□ -0.29
MSR1P21757 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
MSR1P21757 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
MSR1P21757 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.21□□□□□ -0.29
MSR1P21757 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
MSR1P21757 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
MSR1P21757 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.21□□□□□ -0.29
MSR1P21757 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.21□□□□□ -0.29
MSR1P21757 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 RN7SL752P-201ENST00000463779 287 ntBASIC13.21□□□□□ -0.29
MSR1P21757 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
MSR1P21757 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
MSR1P21757 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
MSR1P21757 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.21□□□□□ -0.29
MSR1P21757 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.21□□□□□ -0.29
MSR1P21757 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.21□□□□□ -0.29
MSR1P21757 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
MSR1P21757 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.21□□□□□ -0.29
MSR1P21757 SALL4P5-201ENST00000419001 1760 ntBASIC13.21□□□□□ -0.29
MSR1P21757 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
MSR1P21757 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
MSR1P21757 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MSR1P21757 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.21□□□□□ -0.3
MSR1P21757 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.21□□□□□ -0.3
MSR1P21757 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
MSR1P21757 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
MSR1P21757 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
MSR1P21757 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MSR1P21757 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MSR1P21757 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
MSR1P21757 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MSR1P21757 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
MSR1P21757 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 AC023908.3-201ENST00000564211 3047 ntBASIC13.2□□□□□ -0.3
MSR1P21757 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.2□□□□□ -0.3
MSR1P21757 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.2□□□□□ -0.3
MSR1P21757 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.2□□□□□ -0.3
MSR1P21757 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 FO681548.1-201ENST00000455617 1132 ntBASIC13.2□□□□□ -0.3
MSR1P21757 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.2□□□□□ -0.3
MSR1P21757 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.2□□□□□ -0.3
MSR1P21757 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
MSR1P21757 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 AC007191.1-201ENST00000623179 2995 ntBASIC13.2□□□□□ -0.3
MSR1P21757 AC025048.6-201ENST00000634326 1161 ntBASIC13.2□□□□□ -0.3
MSR1P21757 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MSR1P21757 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms