Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 AC116165.1-201ENST00000611806 668 ntBASIC13.91□□□□□ -0.18
TNFRSF1BP20333 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 BTBD7P1-201ENST00000447253 1453 ntBASIC13.91□□□□□ -0.18
TNFRSF1BP20333 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TNFRSF1BP20333 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.9□□□□□ -0.18
TNFRSF1BP20333 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TNFRSF1BP20333 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
TNFRSF1BP20333 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
TNFRSF1BP20333 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TNFRSF1BP20333 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 RARRES2P5-201ENST00000564013 466 ntBASIC13.89□□□□□ -0.19
TNFRSF1BP20333 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.89□□□□□ -0.19
TNFRSF1BP20333 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms