Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.89■□□□□ 0.45
NCLP19338 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.89■□□□□ 0.45
NCLP19338 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.89■□□□□ 0.45
NCLP19338 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.89■□□□□ 0.45
NCLP19338 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.89■□□□□ 0.45
NCLP19338 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NCLP19338 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.89■□□□□ 0.45
NCLP19338 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
NCLP19338 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.89■□□□□ 0.45
NCLP19338 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.89■□□□□ 0.45
NCLP19338 AL390754.1-201ENST00000619088 582 ntBASIC17.89■□□□□ 0.45
NCLP19338 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC17.89■□□□□ 0.45
NCLP19338 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NCLP19338 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.89■□□□□ 0.45
NCLP19338 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NCLP19338 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLP19338 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NCLP19338 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.88■□□□□ 0.45
NCLP19338 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.88■□□□□ 0.45
NCLP19338 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
NCLP19338 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.88■□□□□ 0.45
NCLP19338 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.88■□□□□ 0.45
NCLP19338 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NCLP19338 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NCLP19338 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NCLP19338 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLP19338 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCLP19338 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.87■□□□□ 0.45
NCLP19338 CICP17-201ENST00000418553 2377 ntBASIC17.87■□□□□ 0.45
NCLP19338 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLP19338 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 GHSR-202ENST00000427970 912 ntBASIC17.87■□□□□ 0.45
NCLP19338 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLP19338 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLP19338 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLP19338 RN7SL828P-201ENST00000607615 303 ntBASIC17.87■□□□□ 0.45
NCLP19338 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NCLP19338 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.87■□□□□ 0.45
NCLP19338 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLP19338 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NCLP19338 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.87■□□□□ 0.45
NCLP19338 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms