Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
BMP4P12644 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
BMP4P12644 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
BMP4P12644 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 MRPS18AP1-201ENST00000414458 589 ntBASIC13.79□□□□□ -0.2
BMP4P12644 AL080243.2-201ENST00000418783 582 ntBASIC13.79□□□□□ -0.2
BMP4P12644 MTND4LP12-201ENST00000448237 295 ntBASIC13.79□□□□□ -0.2
BMP4P12644 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.79□□□□□ -0.2
BMP4P12644 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.79□□□□□ -0.2
BMP4P12644 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.79□□□□□ -0.2
BMP4P12644 AL662799.1-202ENST00000614205 422 ntBASIC13.79□□□□□ -0.2
BMP4P12644 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.79□□□□□ -0.2
BMP4P12644 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.79□□□□□ -0.2
BMP4P12644 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
BMP4P12644 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.79□□□□□ -0.2
BMP4P12644 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 CICP11-201ENST00000434745 2827 ntBASIC13.79□□□□□ -0.2
BMP4P12644 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BMP4P12644 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
BMP4P12644 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
BMP4P12644 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.78□□□□□ -0.2
BMP4P12644 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.78□□□□□ -0.2
BMP4P12644 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.78□□□□□ -0.2
BMP4P12644 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
BMP4P12644 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.78□□□□□ -0.2
BMP4P12644 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
BMP4P12644 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
BMP4P12644 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
BMP4P12644 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.78□□□□□ -0.2
BMP4P12644 SPDYE17-201ENST00000412399 783 ntBASIC13.78□□□□□ -0.2
BMP4P12644 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 AC093004.1-201ENST00000508850 424 ntBASIC13.78□□□□□ -0.2
BMP4P12644 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.78□□□□□ -0.2
BMP4P12644 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.78□□□□□ -0.2
BMP4P12644 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
BMP4P12644 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.78□□□□□ -0.2
BMP4P12644 MIR4321-201ENST00000592276 80 ntBASIC13.78□□□□□ -0.2
BMP4P12644 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.78□□□□□ -0.2
BMP4P12644 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC13.78□□□□□ -0.2
BMP4P12644 AL033527.5-202ENST00000641632 1098 ntBASIC13.78□□□□□ -0.2
BMP4P12644 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
BMP4P12644 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BMP4P12644 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms