Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FAM228BP0C875 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.91■□□□□ 0.14
FAM228BP0C875 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
FAM228BP0C875 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
FAM228BP0C875 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FAM228BP0C875 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.91■□□□□ 0.14
FAM228BP0C875 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.9■□□□□ 0.14
FAM228BP0C875 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.9■□□□□ 0.14
FAM228BP0C875 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FAM228BP0C875 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
FAM228BP0C875 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.9■□□□□ 0.14
FAM228BP0C875 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.9■□□□□ 0.14
FAM228BP0C875 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.9■□□□□ 0.14
FAM228BP0C875 SERBP1P5-201ENST00000510079 1181 ntBASIC15.9■□□□□ 0.14
FAM228BP0C875 CLUHP6-201ENST00000580789 941 ntBASIC15.9■□□□□ 0.14
FAM228BP0C875 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.9■□□□□ 0.14
FAM228BP0C875 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 AL138725.1-201ENST00000407347 1314 ntBASIC15.9■□□□□ 0.14
FAM228BP0C875 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.9■□□□□ 0.14
FAM228BP0C875 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.9■□□□□ 0.14
FAM228BP0C875 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FAM228BP0C875 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
FAM228BP0C875 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.89■□□□□ 0.13
FAM228BP0C875 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.89■□□□□ 0.13
FAM228BP0C875 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
FAM228BP0C875 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.89■□□□□ 0.13
FAM228BP0C875 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 AC011498.7-201ENST00000624986 2027 ntBASIC15.89■□□□□ 0.13
FAM228BP0C875 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
FAM228BP0C875 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
FAM228BP0C875 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 RN7SKP230-201ENST00000365642 335 ntBASIC15.89■□□□□ 0.13
FAM228BP0C875 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.89■□□□□ 0.13
FAM228BP0C875 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.89■□□□□ 0.13
FAM228BP0C875 MYCLP2-201ENST00000449268 967 ntBASIC15.89■□□□□ 0.13
FAM228BP0C875 FO681548.1-201ENST00000455617 1132 ntBASIC15.89■□□□□ 0.13
FAM228BP0C875 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.89■□□□□ 0.13
FAM228BP0C875 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.89■□□□□ 0.13
FAM228BP0C875 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.89■□□□□ 0.13
FAM228BP0C875 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.89■□□□□ 0.13
FAM228BP0C875 AC133539.2-201ENST00000604757 467 ntBASIC15.89■□□□□ 0.13
FAM228BP0C875 AC009118.2-201ENST00000613275 655 ntBASIC15.89■□□□□ 0.13
FAM228BP0C875 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
FAM228BP0C875 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 AC126755.1-201ENST00000525846 6405 ntBASIC15.89■□□□□ 0.13
FAM228BP0C875 MRPL37P1-201ENST00000592451 1337 ntBASIC15.89■□□□□ 0.13
FAM228BP0C875 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FAM228BP0C875 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.89■□□□□ 0.13
FAM228BP0C875 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.88■□□□□ 0.13
FAM228BP0C875 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
FAM228BP0C875 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FAM228BP0C875 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
FAM228BP0C875 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FAM228BP0C875 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FAM228BP0C875 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.88■□□□□ 0.13
FAM228BP0C875 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
FAM228BP0C875 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FAM228BP0C875 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.88■□□□□ 0.13
FAM228BP0C875 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
FAM228BP0C875 ACKR1-201ENST00000368121 1240 ntBASIC15.88■□□□□ 0.13
FAM228BP0C875 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms