Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN1P07384 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN1P07384 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 AC097359.2-201ENST00000604992 2389 ntBASIC14.76□□□□□ -0.05
CAPN1P07384 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 AC018665.1-201ENST00000622927 1362 ntBASIC14.76□□□□□ -0.05
CAPN1P07384 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN1P07384 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 HLA-V-201ENST00000429037 534 ntBASIC14.76□□□□□ -0.05
CAPN1P07384 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.76□□□□□ -0.05
CAPN1P07384 VDAC1P7-201ENST00000462417 847 ntBASIC14.76□□□□□ -0.05
CAPN1P07384 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.76□□□□□ -0.05
CAPN1P07384 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CAPN1P07384 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.76□□□□□ -0.05
CAPN1P07384 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.76□□□□□ -0.05
CAPN1P07384 AC120045.2-201ENST00000567334 178 ntBASIC14.76□□□□□ -0.05
CAPN1P07384 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN1P07384 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN1P07384 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CAPN1P07384 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 AC113367.3-201ENST00000508316 1912 ntBASIC14.76□□□□□ -0.05
CAPN1P07384 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.76□□□□□ -0.05
CAPN1P07384 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN1P07384 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CAPN1P07384 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 AC117489.1-201ENST00000625169 3217 ntBASIC14.75□□□□□ -0.05
CAPN1P07384 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.75□□□□□ -0.05
CAPN1P07384 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CAPN1P07384 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.75□□□□□ -0.05
CAPN1P07384 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.75□□□□□ -0.05
CAPN1P07384 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.75□□□□□ -0.05
CAPN1P07384 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.75□□□□□ -0.05
CAPN1P07384 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.75□□□□□ -0.05
CAPN1P07384 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.75□□□□□ -0.05
CAPN1P07384 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.75□□□□□ -0.05
CAPN1P07384 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.75□□□□□ -0.05
CAPN1P07384 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.75□□□□□ -0.05
CAPN1P07384 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 AC234783.1-201ENST00000441761 496 ntBASIC14.75□□□□□ -0.05
CAPN1P07384 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.75□□□□□ -0.05
CAPN1P07384 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.75□□□□□ -0.05
CAPN1P07384 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.75□□□□□ -0.05
CAPN1P07384 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.75□□□□□ -0.05
CAPN1P07384 RPL13AP25-201ENST00000484130 612 ntBASIC14.75□□□□□ -0.05
CAPN1P07384 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.75□□□□□ -0.05
CAPN1P07384 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CAPN1P07384 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.75□□□□□ -0.05
CAPN1P07384 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.75□□□□□ -0.05
CAPN1P07384 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.75□□□□□ -0.05
CAPN1P07384 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.75□□□□□ -0.05
CAPN1P07384 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.75□□□□□ -0.05
CAPN1P07384 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.75□□□□□ -0.05
CAPN1P07384 COX11-210ENST00000639671 696 ntBASIC14.75□□□□□ -0.05
CAPN1P07384 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CAPN1P07384 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN1P07384 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.75□□□□□ -0.05
CAPN1P07384 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms