Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGN1P05114 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HMGN1P05114 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.58□□□□□ -0.24
HMGN1P05114 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.58□□□□□ -0.24
HMGN1P05114 AL139385.1-201ENST00000611744 3272 ntBASIC13.58□□□□□ -0.24
HMGN1P05114 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.58□□□□□ -0.24
HMGN1P05114 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 PTENP1-202ENST00000532280 3996 ntBASIC13.57□□□□□ -0.24
HMGN1P05114 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
HMGN1P05114 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 AL139400.1-201ENST00000366220 510 ntBASIC13.57□□□□□ -0.24
HMGN1P05114 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 AC114501.2-201ENST00000439631 535 ntBASIC13.57□□□□□ -0.24
HMGN1P05114 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
HMGN1P05114 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 AL671883.3-201ENST00000603274 991 ntBASIC13.57□□□□□ -0.24
HMGN1P05114 AL158212.4-201ENST00000624062 1286 ntBASIC13.57□□□□□ -0.24
HMGN1P05114 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.57□□□□□ -0.24
HMGN1P05114 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGN1P05114 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGN1P05114 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGN1P05114 INE2-201ENST00000630399 1874 ntBASIC13.57□□□□□ -0.24
HMGN1P05114 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 DRD5P1-201ENST00000456605 1438 ntBASIC13.56□□□□□ -0.24
HMGN1P05114 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HMGN1P05114 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.56□□□□□ -0.24
HMGN1P05114 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.56□□□□□ -0.24
HMGN1P05114 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGN1P05114 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 AC090505.1-201ENST00000430515 1834 ntBASIC13.56□□□□□ -0.24
HMGN1P05114 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HMGN1P05114 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.56□□□□□ -0.24
HMGN1P05114 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGN1P05114 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.56□□□□□ -0.24
HMGN1P05114 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.56□□□□□ -0.24
HMGN1P05114 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HMGN1P05114 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
HMGN1P05114 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HMGN1P05114 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.56□□□□□ -0.24
HMGN1P05114 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
HMGN1P05114 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms