Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.26□□□□□ -0.61
LTAP01374 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LTAP01374 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
LTAP01374 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
LTAP01374 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
LTAP01374 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 AL158070.2-201ENST00000623713 1621 ntBASIC11.25□□□□□ -0.61
LTAP01374 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
LTAP01374 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LTAP01374 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.25□□□□□ -0.61
LTAP01374 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.25□□□□□ -0.61
LTAP01374 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.25□□□□□ -0.61
LTAP01374 AL450487.1-201ENST00000426799 995 ntBASIC11.25□□□□□ -0.61
LTAP01374 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.25□□□□□ -0.61
LTAP01374 SPDYE14P-201ENST00000442619 822 ntBASIC11.25□□□□□ -0.61
LTAP01374 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
LTAP01374 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
LTAP01374 AC009078.2-202ENST00000463353 338 ntBASIC11.25□□□□□ -0.61
LTAP01374 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.25□□□□□ -0.61
LTAP01374 GAPDHP40-201ENST00000505218 1006 ntBASIC11.25□□□□□ -0.61
LTAP01374 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.25□□□□□ -0.61
LTAP01374 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.25□□□□□ -0.61
LTAP01374 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
LTAP01374 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.25□□□□□ -0.61
LTAP01374 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.25□□□□□ -0.61
LTAP01374 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.25□□□□□ -0.61
LTAP01374 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.25□□□□□ -0.61
LTAP01374 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.25□□□□□ -0.61
LTAP01374 AC004461.2-201ENST00000629517 803 ntBASIC11.25□□□□□ -0.61
LTAP01374 AC105339.1-204ENST00000636249 355 ntBASIC11.25□□□□□ -0.61
LTAP01374 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.25□□□□□ -0.61
LTAP01374 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 KRT8P35-201ENST00000483942 1338 ntBASIC11.25□□□□□ -0.61
LTAP01374 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.25□□□□□ -0.61
LTAP01374 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.25□□□□□ -0.61
LTAP01374 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.25□□□□□ -0.61
LTAP01374 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.25□□□□□ -0.61
LTAP01374 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
LTAP01374 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.25□□□□□ -0.61
LTAP01374 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.25□□□□□ -0.61
LTAP01374 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.25□□□□□ -0.61
LTAP01374 AC068760.1-201ENST00000493579 1953 ntBASIC11.25□□□□□ -0.61
LTAP01374 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.25□□□□□ -0.61
LTAP01374 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LTAP01374 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.24□□□□□ -0.61
LTAP01374 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.24□□□□□ -0.61
LTAP01374 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.24□□□□□ -0.61
LTAP01374 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
LTAP01374 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 AC114271.1-201ENST00000612689 2813 ntBASIC11.24□□□□□ -0.61
LTAP01374 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.24□□□□□ -0.61
LTAP01374 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.24□□□□□ -0.61
LTAP01374 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LTAP01374 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
LTAP01374 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.24□□□□□ -0.61
LTAP01374 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
LTAP01374 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LTAP01374 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LTAP01374 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms