Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.52□□□□□ -0.09
LDLRP01130 GHSR-202ENST00000427970 912 ntBASIC14.52□□□□□ -0.09
LDLRP01130 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.52□□□□□ -0.09
LDLRP01130 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.52□□□□□ -0.09
LDLRP01130 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.52□□□□□ -0.09
LDLRP01130 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.52□□□□□ -0.09
LDLRP01130 RN7SL219P-201ENST00000582872 296 ntBASIC14.52□□□□□ -0.09
LDLRP01130 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.52□□□□□ -0.09
LDLRP01130 AC008735.3-201ENST00000596646 500 ntBASIC14.52□□□□□ -0.09
LDLRP01130 TMEM261P1-201ENST00000604899 340 ntBASIC14.52□□□□□ -0.09
LDLRP01130 MIR6869-201ENST00000619434 62 ntBASIC14.52□□□□□ -0.09
LDLRP01130 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.52□□□□□ -0.09
LDLRP01130 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LDLRP01130 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.52□□□□□ -0.09
LDLRP01130 AP001267.2-201ENST00000532619 2086 ntBASIC14.52□□□□□ -0.09
LDLRP01130 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 MBLAC2-202ENST00000514906 1936 ntBASIC14.52□□□□□ -0.09
LDLRP01130 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.52□□□□□ -0.09
LDLRP01130 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.52□□□□□ -0.09
LDLRP01130 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LDLRP01130 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.51□□□□□ -0.09
LDLRP01130 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.51□□□□□ -0.09
LDLRP01130 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 AC152010.1-201ENST00000415779 2006 ntBASIC14.51□□□□□ -0.09
LDLRP01130 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LDLRP01130 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LDLRP01130 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.51□□□□□ -0.09
LDLRP01130 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.51□□□□□ -0.09
LDLRP01130 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LDLRP01130 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.51□□□□□ -0.09
LDLRP01130 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.51□□□□□ -0.09
LDLRP01130 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.51□□□□□ -0.09
LDLRP01130 CROCCP4-201ENST00000457096 498 ntBASIC14.51□□□□□ -0.09
LDLRP01130 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.51□□□□□ -0.09
LDLRP01130 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LDLRP01130 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.51□□□□□ -0.09
LDLRP01130 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.51□□□□□ -0.09
LDLRP01130 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
LDLRP01130 AC023310.3-201ENST00000557027 670 ntBASIC14.51□□□□□ -0.09
LDLRP01130 AC100756.1-201ENST00000562736 682 ntBASIC14.51□□□□□ -0.09
LDLRP01130 AC138749.3-201ENST00000567691 622 ntBASIC14.51□□□□□ -0.09
LDLRP01130 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LDLRP01130 AC015936.2-201ENST00000593177 259 ntBASIC14.51□□□□□ -0.09
LDLRP01130 AC093726.1-201ENST00000608064 963 ntBASIC14.51□□□□□ -0.09
LDLRP01130 AC116165.1-201ENST00000611806 668 ntBASIC14.51□□□□□ -0.09
LDLRP01130 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LDLRP01130 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LDLRP01130 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LDLRP01130 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LDLRP01130 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.51□□□□□ -0.09
LDLRP01130 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.51□□□□□ -0.09
LDLRP01130 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.51□□□□□ -0.09
LDLRP01130 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LDLRP01130 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.5□□□□□ -0.09
LDLRP01130 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LDLRP01130 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LDLRP01130 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.5□□□□□ -0.09
LDLRP01130 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LDLRP01130 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.5□□□□□ -0.09
LDLRP01130 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LDLRP01130 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms