Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MT-CO1P00395 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-CO1P00395 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-CO1P00395 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-CO1P00395 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.33■□□□□ 0.04
MT-CO1P00395 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-CO1P00395 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-CO1P00395 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-CO1P00395 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
MT-CO1P00395 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-CO1P00395 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-CO1P00395 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-CO1P00395 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-CO1P00395 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-CO1P00395 AC117489.1-201ENST00000625169 3217 ntBASIC15.32■□□□□ 0.04
MT-CO1P00395 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.32■□□□□ 0.04
MT-CO1P00395 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
MT-CO1P00395 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
MT-CO1P00395 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
MT-CO1P00395 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MT-CO1P00395 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MT-CO1P00395 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-CO1P00395 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
MT-CO1P00395 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 AC106820.3-201ENST00000561653 397 ntBASIC15.32■□□□□ 0.04
MT-CO1P00395 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.32■□□□□ 0.04
MT-CO1P00395 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MT-CO1P00395 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-CO1P00395 ZBED1P1-201ENST00000502364 1930 ntBASIC15.32■□□□□ 0.04
MT-CO1P00395 TUBB1P2-201ENST00000422712 1306 ntBASIC15.32■□□□□ 0.04
MT-CO1P00395 TUBB1P1-201ENST00000503144 1300 ntBASIC15.32■□□□□ 0.04
MT-CO1P00395 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-CO1P00395 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-CO1P00395 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-CO1P00395 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-CO1P00395 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MT-CO1P00395 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MT-CO1P00395 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MT-CO1P00395 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 AC015656.1-201ENST00000624209 3578 ntBASIC15.31■□□□□ 0.04
MT-CO1P00395 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MT-CO1P00395 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 AC026748.1-201ENST00000624349 3251 ntBASIC15.31■□□□□ 0.04
MT-CO1P00395 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
MT-CO1P00395 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-CO1P00395 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-CO1P00395 CNN2P10-201ENST00000443067 918 ntBASIC15.31■□□□□ 0.04
MT-CO1P00395 COX5BP1-201ENST00000507622 393 ntBASIC15.31■□□□□ 0.04
MT-CO1P00395 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-CO1P00395 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-CO1P00395 AP006547.1-201ENST00000563435 692 ntBASIC15.31■□□□□ 0.04
MT-CO1P00395 RN7SL560P-201ENST00000577943 264 ntBASIC15.31■□□□□ 0.04
MT-CO1P00395 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.31■□□□□ 0.04
MT-CO1P00395 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms