Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 AC018529.2-202ENST00000611482 3087 ntBASIC19.16■□□□□ 0.66
LTN1O94822 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 AC117503.4-201ENST00000623229 1418 ntBASIC19.16■□□□□ 0.66
LTN1O94822 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LTN1O94822 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC19.16■□□□□ 0.66
LTN1O94822 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC19.16■□□□□ 0.66
LTN1O94822 IDS-203ENST00000428056 1213 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 MYADML-201ENST00000474610 2147 ntBASIC19.16■□□□□ 0.66
LTN1O94822 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC19.16■□□□□ 0.66
LTN1O94822 NT5C-204ENST00000578337 582 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
LTN1O94822 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
LTN1O94822 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LTN1O94822 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
LTN1O94822 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.15■□□□□ 0.66
LTN1O94822 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.15■□□□□ 0.66
LTN1O94822 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LTN1O94822 LINC00265-2P-201ENST00000413372 782 ntBASIC19.15■□□□□ 0.66
LTN1O94822 AC006987.1-201ENST00000413610 527 ntBASIC19.15■□□□□ 0.66
LTN1O94822 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC19.15■□□□□ 0.66
LTN1O94822 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
LTN1O94822 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC19.15■□□□□ 0.66
LTN1O94822 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC19.15■□□□□ 0.66
LTN1O94822 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.15■□□□□ 0.66
LTN1O94822 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC19.15■□□□□ 0.66
LTN1O94822 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
LTN1O94822 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC19.15■□□□□ 0.66
LTN1O94822 AC073592.2-201ENST00000623062 780 ntBASIC19.15■□□□□ 0.66
LTN1O94822 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC19.15■□□□□ 0.66
LTN1O94822 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC19.15■□□□□ 0.66
LTN1O94822 LINC00431-202ENST00000636375 159 ntBASIC19.15■□□□□ 0.66
LTN1O94822 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.15■□□□□ 0.66
LTN1O94822 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LTN1O94822 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC19.15■□□□□ 0.66
LTN1O94822 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
LTN1O94822 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.15■□□□□ 0.66
LTN1O94822 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTN1O94822 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.15■□□□□ 0.66
LTN1O94822 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
LTN1O94822 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LTN1O94822 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
LTN1O94822 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LTN1O94822 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LTN1O94822 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LTN1O94822 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LTN1O94822 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.66
LTN1O94822 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
LTN1O94822 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LTN1O94822 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.14■□□□□ 0.66
LTN1O94822 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.14■□□□□ 0.66
LTN1O94822 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC19.14■□□□□ 0.66
LTN1O94822 OR2A1-AS1-210ENST00000496968 531 ntBASIC19.14■□□□□ 0.66
LTN1O94822 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.14■□□□□ 0.66
LTN1O94822 AL021707.6-201ENST00000609212 491 ntBASIC19.14■□□□□ 0.66
LTN1O94822 PPIA-210ENST00000620047 827 ntTSL 5 BASIC19.14■□□□□ 0.66
LTN1O94822 AC011471.3-201ENST00000623576 402 ntBASIC19.14■□□□□ 0.66
LTN1O94822 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC19.14■□□□□ 0.65
LTN1O94822 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 TCAF2P1-201ENST00000291129 2421 ntBASIC19.14■□□□□ 0.65
LTN1O94822 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
LTN1O94822 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LTN1O94822 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC19.14■□□□□ 0.65
LTN1O94822 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LTN1O94822 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms