Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
HCN1O60741 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HCN1O60741 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
HCN1O60741 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HCN1O60741 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 AC006504.5-208ENST00000588784 2401 ntBASIC14.03□□□□□ -0.16
HCN1O60741 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HCN1O60741 BAATP1-201ENST00000412284 1225 ntBASIC14.03□□□□□ -0.16
HCN1O60741 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.03□□□□□ -0.16
HCN1O60741 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HCN1O60741 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.03□□□□□ -0.16
HCN1O60741 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.03□□□□□ -0.16
HCN1O60741 CLUHP6-201ENST00000580789 941 ntBASIC14.03□□□□□ -0.16
HCN1O60741 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.03□□□□□ -0.16
HCN1O60741 AC133552.6-201ENST00000613406 534 ntBASIC14.03□□□□□ -0.16
HCN1O60741 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HCN1O60741 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.03□□□□□ -0.16
HCN1O60741 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HCN1O60741 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.03□□□□□ -0.16
HCN1O60741 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HCN1O60741 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCN1O60741 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HCN1O60741 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
HCN1O60741 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.02□□□□□ -0.16
HCN1O60741 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.02□□□□□ -0.16
HCN1O60741 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 AL359183.1-201ENST00000623796 2132 ntBASIC14.02□□□□□ -0.16
HCN1O60741 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.02□□□□□ -0.16
HCN1O60741 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.02□□□□□ -0.16
HCN1O60741 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
HCN1O60741 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCN1O60741 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.02□□□□□ -0.16
HCN1O60741 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 AC012441.1-201ENST00000446669 685 ntBASIC14.02□□□□□ -0.17
HCN1O60741 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HCN1O60741 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
HCN1O60741 AC104989.1-201ENST00000519711 778 ntBASIC14.02□□□□□ -0.17
HCN1O60741 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.02□□□□□ -0.17
HCN1O60741 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.02□□□□□ -0.17
HCN1O60741 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.02□□□□□ -0.17
HCN1O60741 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.02□□□□□ -0.17
HCN1O60741 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.02□□□□□ -0.17
HCN1O60741 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.02□□□□□ -0.17
HCN1O60741 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 AC107373.2-201ENST00000607735 490 ntBASIC14.02□□□□□ -0.17
HCN1O60741 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.02□□□□□ -0.17
HCN1O60741 AC005252.2-201ENST00000624630 1141 ntBASIC14.02□□□□□ -0.17
HCN1O60741 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.02□□□□□ -0.17
HCN1O60741 AL645728.2-202ENST00000641679 227 ntBASIC14.02□□□□□ -0.17
HCN1O60741 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCN1O60741 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms