Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.83■□□□□ 0.12
CAPN9O14815 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CAPN9O14815 BOLA2P3-201ENST00000404566 256 ntBASIC15.83■□□□□ 0.12
CAPN9O14815 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN9O14815 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 AC112492.5-201ENST00000421897 457 ntBASIC15.83■□□□□ 0.12
CAPN9O14815 U91328.1-201ENST00000437528 223 ntBASIC15.83■□□□□ 0.12
CAPN9O14815 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.83■□□□□ 0.12
CAPN9O14815 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CAPN9O14815 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CAPN9O14815 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CAPN9O14815 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CAPN9O14815 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.83■□□□□ 0.12
CAPN9O14815 AC025279.2-201ENST00000569730 653 ntBASIC15.83■□□□□ 0.12
CAPN9O14815 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.83■□□□□ 0.12
CAPN9O14815 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CAPN9O14815 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CAPN9O14815 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CAPN9O14815 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CAPN9O14815 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.83■□□□□ 0.12
CAPN9O14815 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.83■□□□□ 0.12
CAPN9O14815 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CAPN9O14815 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CAPN9O14815 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.82■□□□□ 0.12
CAPN9O14815 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.82■□□□□ 0.12
CAPN9O14815 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CAPN9O14815 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN9O14815 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 TPM3P8-201ENST00000330554 643 ntBASIC15.82■□□□□ 0.12
CAPN9O14815 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CAPN9O14815 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CAPN9O14815 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.82■□□□□ 0.12
CAPN9O14815 CROCCP4-201ENST00000457096 498 ntBASIC15.82■□□□□ 0.12
CAPN9O14815 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.82■□□□□ 0.12
CAPN9O14815 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.82■□□□□ 0.12
CAPN9O14815 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.82■□□□□ 0.12
CAPN9O14815 RN7SL48P-201ENST00000579283 293 ntBASIC15.82■□□□□ 0.12
CAPN9O14815 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN9O14815 AC132938.4-201ENST00000623835 848 ntBASIC15.82■□□□□ 0.12
CAPN9O14815 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 AL138709.1-201ENST00000614840 1693 ntBASIC15.82■□□□□ 0.12
CAPN9O14815 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.82■□□□□ 0.12
CAPN9O14815 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CAPN9O14815 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CAPN9O14815 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CAPN9O14815 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.82■□□□□ 0.12
CAPN9O14815 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CAPN9O14815 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN9O14815 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPN9O14815 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN9O14815 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CAPN9O14815 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN9O14815 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN9O14815 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CAPN9O14815 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN9O14815 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPN9O14815 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms