Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 AC245100.3-201ENST00000441281 285 ntBASIC15.1■□□□□ 0.01
AP3B1O00203 AC093433.1-201ENST00000458048 571 ntBASIC15.1■□□□□ 0.01
AP3B1O00203 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.1■□□□□ 0.01
AP3B1O00203 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.1■□□□□ 0.01
AP3B1O00203 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.1■□□□□ 0.01
AP3B1O00203 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.1■□□□□ 0.01
AP3B1O00203 AC008494.3-201ENST00000606615 944 ntBASIC15.1■□□□□ 0.01
AP3B1O00203 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.1■□□□□ 0.01
AP3B1O00203 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 AL033527.5-201ENST00000641382 801 ntBASIC15.1■□□□□ 0.01
AP3B1O00203 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 AC152010.1-201ENST00000415779 2006 ntBASIC15.1■□□□□ 0.01
AP3B1O00203 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 PTENP1-202ENST00000532280 3996 ntBASIC15.1■□□□□ 0.01
AP3B1O00203 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
AP3B1O00203 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3B1O00203 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3B1O00203 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3B1O00203 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.09■□□□□ 0.01
AP3B1O00203 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
AP3B1O00203 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
AP3B1O00203 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3B1O00203 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
AP3B1O00203 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.09■□□□□ 0.01
AP3B1O00203 RN7SL48P-201ENST00000579283 293 ntBASIC15.09■□□□□ 0.01
AP3B1O00203 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
AP3B1O00203 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 WFDC1-204ENST00000613603 549 ntBASIC15.09■□□□□ 0.01
AP3B1O00203 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
AP3B1O00203 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP3B1O00203 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3B1O00203 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3B1O00203 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3B1O00203 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP3B1O00203 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.08■□□□□ 0.01
AP3B1O00203 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP3B1O00203 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
AP3B1O00203 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP3B1O00203 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP3B1O00203 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP3B1O00203 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.08■□□□□ 0.01
AP3B1O00203 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
AP3B1O00203 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms