Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 AL162726.2-201ENST00000438986 1017 ntBASIC12.03□□□□□ -0.48
SRRM4A7MD48 FO681548.1-201ENST00000455617 1132 ntBASIC12.03□□□□□ -0.48
SRRM4A7MD48 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 AC190387.1-201ENST00000551683 408 ntBASIC12.03□□□□□ -0.48
SRRM4A7MD48 TP53TG3HP-202ENST00000569755 579 ntBASIC12.03□□□□□ -0.48
SRRM4A7MD48 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.03□□□□□ -0.48
SRRM4A7MD48 AL033527.5-201ENST00000641382 801 ntBASIC12.03□□□□□ -0.48
SRRM4A7MD48 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 AC136759.1-202ENST00000530858 2194 ntBASIC12.03□□□□□ -0.48
SRRM4A7MD48 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRRM4A7MD48 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.02□□□□□ -0.48
SRRM4A7MD48 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRRM4A7MD48 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
SRRM4A7MD48 AC006504.5-208ENST00000588784 2401 ntBASIC12.02□□□□□ -0.48
SRRM4A7MD48 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRRM4A7MD48 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SRRM4A7MD48 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRRM4A7MD48 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SRRM4A7MD48 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRRM4A7MD48 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRRM4A7MD48 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.02□□□□□ -0.48
SRRM4A7MD48 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.02□□□□□ -0.48
SRRM4A7MD48 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SRRM4A7MD48 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
SRRM4A7MD48 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 DGCR5-201ENST00000399539 862 ntBASIC12.02□□□□□ -0.49
SRRM4A7MD48 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 AC007969.1-201ENST00000433675 447 ntBASIC12.02□□□□□ -0.49
SRRM4A7MD48 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 KRT18P25-201ENST00000508931 1278 ntBASIC12.02□□□□□ -0.49
SRRM4A7MD48 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 AC140912.1-201ENST00000577171 1054 ntBASIC12.02□□□□□ -0.49
SRRM4A7MD48 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms