Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 AC079316.1-201ENST00000548397 411 ntBASIC14.17□□□□□ -0.14
LRIT2A6NDA9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 AC073413.1-201ENST00000603927 732 ntBASIC14.17□□□□□ -0.14
LRIT2A6NDA9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 AGGF1P1-201ENST00000509500 2073 ntBASIC14.17□□□□□ -0.14
LRIT2A6NDA9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 AC097359.2-201ENST00000604992 2389 ntBASIC14.17□□□□□ -0.14
LRIT2A6NDA9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRIT2A6NDA9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 AC026954.1-201ENST00000429771 1293 ntBASIC14.16□□□□□ -0.14
LRIT2A6NDA9 TPT1P11-201ENST00000458482 498 ntBASIC14.16□□□□□ -0.14
LRIT2A6NDA9 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 AC104989.1-201ENST00000519711 778 ntBASIC14.16□□□□□ -0.14
LRIT2A6NDA9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 SNX29P1-201ENST00000548357 1007 ntBASIC14.16□□□□□ -0.14
LRIT2A6NDA9 C2orf69P2-201ENST00000562032 1123 ntBASIC14.16□□□□□ -0.14
LRIT2A6NDA9 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 MIR6775-201ENST00000617557 69 ntBASIC14.16□□□□□ -0.14
LRIT2A6NDA9 AC008687.7-202ENST00000637404 953 ntBASIC14.16□□□□□ -0.14
LRIT2A6NDA9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRIT2A6NDA9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms