Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 AL133267.1-201ENST00000398220 340 ntBASIC16.28■□□□□ 0.2
CCDC66A2RUB6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 MIR4453-201ENST00000584019 89 ntBASIC16.28■□□□□ 0.2
CCDC66A2RUB6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC66A2RUB6 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 SPDYE7P-202ENST00000420373 878 ntBASIC16.27■□□□□ 0.2
CCDC66A2RUB6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 AC023141.5-201ENST00000458585 616 ntBASIC16.27■□□□□ 0.2
CCDC66A2RUB6 SERBP1P3-201ENST00000459980 809 ntBASIC16.27■□□□□ 0.2
CCDC66A2RUB6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 MIR6080-201ENST00000617359 66 ntBASIC16.27■□□□□ 0.2
CCDC66A2RUB6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 AL645728.2-202ENST00000641679 227 ntBASIC16.27■□□□□ 0.2
CCDC66A2RUB6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC66A2RUB6 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CCDC66A2RUB6 AP000845.1-201ENST00000581677 2131 ntBASIC16.27■□□□□ 0.19
CCDC66A2RUB6 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 CETN4P-206ENST00000642099 2168 ntBASIC16.26■□□□□ 0.19
CCDC66A2RUB6 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AC211486.1-202ENST00000416371 468 ntBASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AC211476.1-201ENST00000503899 468 ntBASIC16.26■□□□□ 0.19
CCDC66A2RUB6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC66A2RUB6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms