Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM129A0AVI4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM129A0AVI4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM129A0AVI4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM129A0AVI4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 DGCR5-201ENST00000399539 862 ntBASIC13.54□□□□□ -0.24
TMEM129A0AVI4 MEP1AP4-201ENST00000423244 1087 ntBASIC13.54□□□□□ -0.24
TMEM129A0AVI4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 KRT18P43-201ENST00000469825 1281 ntBASIC13.54□□□□□ -0.24
TMEM129A0AVI4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 AC055876.2-201ENST00000531834 546 ntBASIC13.54□□□□□ -0.24
TMEM129A0AVI4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 AC140912.1-201ENST00000577171 1054 ntBASIC13.54□□□□□ -0.24
TMEM129A0AVI4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM129A0AVI4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 KRT18P64-201ENST00000434946 1219 ntBASIC13.53□□□□□ -0.24
TMEM129A0AVI4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 AC099568.2-201ENST00000609194 695 ntBASIC13.53□□□□□ -0.24
TMEM129A0AVI4 AL391069.4-201ENST00000609583 481 ntBASIC13.53□□□□□ -0.24
TMEM129A0AVI4 AC012645.4-201ENST00000610691 1061 ntBASIC13.53□□□□□ -0.24
TMEM129A0AVI4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 AL358472.5-202ENST00000641448 1267 ntBASIC13.53□□□□□ -0.24
TMEM129A0AVI4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM129A0AVI4 AC015818.8-201ENST00000587907 1519 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms