Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC093909.3-201ENST00000504783 336 ntBASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC011247.3-201ENST00000603297 438 ntBASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC002472.4-201ENST00000641915 272 ntBASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.6■□□□□ 0.57
LOC102724428A0A0B4J2F2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC006372.4-201ENST00000624122 1543 ntBASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 RPL35P9-201ENST00000446059 350 ntBASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 RN7SL357P-201ENST00000581065 298 ntBASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 KHSRPP1-201ENST00000427983 1768 ntBASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 TMBIM7P-203ENST00000641617 1718 ntBASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LOC102724428A0A0B4J2F2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LOC102724428A0A0B4J2F2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LOC102724428A0A0B4J2F2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AQP7P5-201ENST00000428759 1049 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AQP7P4-201ENST00000447083 1042 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC018638.5-201ENST00000450885 754 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AQP7P2-201ENST00000453967 1041 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 OR5BD1P-201ENST00000532527 817 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AQP7P3-201ENST00000624547 1041 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC002044.2-201ENST00000624910 970 ntBASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.58■□□□□ 0.56
LOC102724428A0A0B4J2F2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms