Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AL022069.1-201ENST00000568025 1636 ntBASIC28.27■■■□□ 2.12
TNFRSF11AQ9Y6Q6 AC004812.2-201ENST00000611079 2094 ntBASIC28.27■■■□□ 2.12
TNFRSF11AQ9Y6Q6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
TNFRSF11AQ9Y6Q6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
TNFRSF11AQ9Y6Q6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.25■■■□□ 2.11
TNFRSF11AQ9Y6Q6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.25■■■□□ 2.11
TNFRSF11AQ9Y6Q6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.25■■■□□ 2.11
TNFRSF11AQ9Y6Q6 MIR3621-201ENST00000580529 85 ntBASIC28.25■■■□□ 2.11
TNFRSF11AQ9Y6Q6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.25■■■□□ 2.11
TNFRSF11AQ9Y6Q6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TNFRSF11AQ9Y6Q6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
TNFRSF11AQ9Y6Q6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.24■■■□□ 2.11
TNFRSF11AQ9Y6Q6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
TNFRSF11AQ9Y6Q6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TNFRSF11AQ9Y6Q6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.24■■■□□ 2.11
TNFRSF11AQ9Y6Q6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TNFRSF11AQ9Y6Q6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.23■■■□□ 2.11
TNFRSF11AQ9Y6Q6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TNFRSF11AQ9Y6Q6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.23■■■□□ 2.11
TNFRSF11AQ9Y6Q6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TNFRSF11AQ9Y6Q6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.23■■■□□ 2.11
TNFRSF11AQ9Y6Q6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
TNFRSF11AQ9Y6Q6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
TNFRSF11AQ9Y6Q6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TNFRSF11AQ9Y6Q6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.22■■■□□ 2.11
TNFRSF11AQ9Y6Q6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.22■■■□□ 2.11
TNFRSF11AQ9Y6Q6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.22■■■□□ 2.11
TNFRSF11AQ9Y6Q6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
TNFRSF11AQ9Y6Q6 AC131281.2-201ENST00000520478 145 ntBASIC28.22■■■□□ 2.11
TNFRSF11AQ9Y6Q6 AL512631.2-201ENST00000604634 923 ntBASIC28.22■■■□□ 2.11
TNFRSF11AQ9Y6Q6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
TNFRSF11AQ9Y6Q6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TNFRSF11AQ9Y6Q6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TNFRSF11AQ9Y6Q6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TNFRSF11AQ9Y6Q6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.21■■■□□ 2.11
TNFRSF11AQ9Y6Q6 MIR4466-201ENST00000606121 54 ntBASIC28.21■■■□□ 2.11
TNFRSF11AQ9Y6Q6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TNFRSF11AQ9Y6Q6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TNFRSF11AQ9Y6Q6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TNFRSF11AQ9Y6Q6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.11
TNFRSF11AQ9Y6Q6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TNFRSF11AQ9Y6Q6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.2■■■□□ 2.1
TNFRSF11AQ9Y6Q6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TNFRSF11AQ9Y6Q6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TNFRSF11AQ9Y6Q6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.19■■■□□ 2.1
TNFRSF11AQ9Y6Q6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.19■■■□□ 2.1
TNFRSF11AQ9Y6Q6 LINC00543-201ENST00000567234 1845 ntBASIC28.19■■■□□ 2.1
TNFRSF11AQ9Y6Q6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
TNFRSF11AQ9Y6Q6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
TNFRSF11AQ9Y6Q6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
TNFRSF11AQ9Y6Q6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TNFRSF11AQ9Y6Q6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
TNFRSF11AQ9Y6Q6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TNFRSF11AQ9Y6Q6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TNFRSF11AQ9Y6Q6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.18■■■□□ 2.1
TNFRSF11AQ9Y6Q6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.18■■■□□ 2.1
TNFRSF11AQ9Y6Q6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.18■■■□□ 2.1
TNFRSF11AQ9Y6Q6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.18■■■□□ 2.1
TNFRSF11AQ9Y6Q6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TNFRSF11AQ9Y6Q6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.17■■■□□ 2.1
TNFRSF11AQ9Y6Q6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.17■■■□□ 2.1
TNFRSF11AQ9Y6Q6 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.17■■■□□ 2.1
TNFRSF11AQ9Y6Q6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TNFRSF11AQ9Y6Q6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TNFRSF11AQ9Y6Q6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TNFRSF11AQ9Y6Q6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TNFRSF11AQ9Y6Q6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TNFRSF11AQ9Y6Q6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TNFRSF11AQ9Y6Q6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TNFRSF11AQ9Y6Q6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TNFRSF11AQ9Y6Q6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TNFRSF11AQ9Y6Q6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TNFRSF11AQ9Y6Q6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TNFRSF11AQ9Y6Q6 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.15■■■□□ 2.1
TNFRSF11AQ9Y6Q6 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.15■■■□□ 2.1
TNFRSF11AQ9Y6Q6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TNFRSF11AQ9Y6Q6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TNFRSF11AQ9Y6Q6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TNFRSF11AQ9Y6Q6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TNFRSF11AQ9Y6Q6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.15■■■□□ 2.1
TNFRSF11AQ9Y6Q6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TNFRSF11AQ9Y6Q6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TNFRSF11AQ9Y6Q6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TNFRSF11AQ9Y6Q6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.14■■■□□ 2.1
TNFRSF11AQ9Y6Q6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TNFRSF11AQ9Y6Q6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TNFRSF11AQ9Y6Q6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.13■■■□□ 2.09
TNFRSF11AQ9Y6Q6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TNFRSF11AQ9Y6Q6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
TNFRSF11AQ9Y6Q6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TNFRSF11AQ9Y6Q6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
TNFRSF11AQ9Y6Q6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TNFRSF11AQ9Y6Q6 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.12■■■□□ 2.09
TNFRSF11AQ9Y6Q6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC28.12■■■□□ 2.09
TNFRSF11AQ9Y6Q6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC28.12■■■□□ 2.09
TNFRSF11AQ9Y6Q6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TNFRSF11AQ9Y6Q6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.11■■■□□ 2.09
TNFRSF11AQ9Y6Q6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TNFRSF11AQ9Y6Q6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.11■■■□□ 2.09
TNFRSF11AQ9Y6Q6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms