Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.21■■□□□ 1.79
PTCH2Q9Y6C5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PTCH2Q9Y6C5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.2■■□□□ 1.79
PTCH2Q9Y6C5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
PTCH2Q9Y6C5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.2■■□□□ 1.78
PTCH2Q9Y6C5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCH2Q9Y6C5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCH2Q9Y6C5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.19■■□□□ 1.78
PTCH2Q9Y6C5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTCH2Q9Y6C5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTCH2Q9Y6C5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTCH2Q9Y6C5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTCH2Q9Y6C5 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.19■■□□□ 1.78
PTCH2Q9Y6C5 AC245100.8-202ENST00000629247 1058 ntBASIC26.19■■□□□ 1.78
PTCH2Q9Y6C5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTCH2Q9Y6C5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.18■■□□□ 1.78
PTCH2Q9Y6C5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTCH2Q9Y6C5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTCH2Q9Y6C5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.18■■□□□ 1.78
PTCH2Q9Y6C5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC26.18■■□□□ 1.78
PTCH2Q9Y6C5 AC241377.3-202ENST00000626088 1088 ntBASIC26.18■■□□□ 1.78
PTCH2Q9Y6C5 AC241585.3-202ENST00000628937 1088 ntBASIC26.18■■□□□ 1.78
PTCH2Q9Y6C5 C17orf82-201ENST00000623772 1530 ntBASIC26.18■■□□□ 1.78
PTCH2Q9Y6C5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.17■■□□□ 1.78
PTCH2Q9Y6C5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
PTCH2Q9Y6C5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.17■■□□□ 1.78
PTCH2Q9Y6C5 MIR3181-201ENST00000578512 73 ntBASIC26.17■■□□□ 1.78
PTCH2Q9Y6C5 AC126544.1-201ENST00000580842 1059 ntBASIC26.17■■□□□ 1.78
PTCH2Q9Y6C5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.17■■□□□ 1.78
PTCH2Q9Y6C5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTCH2Q9Y6C5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.17■■□□□ 1.78
PTCH2Q9Y6C5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.16■■□□□ 1.78
PTCH2Q9Y6C5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.16■■□□□ 1.78
PTCH2Q9Y6C5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.16■■□□□ 1.78
PTCH2Q9Y6C5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.16■■□□□ 1.78
PTCH2Q9Y6C5 TSPY26P-201ENST00000476365 1326 ntBASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 AC027612.3-201ENST00000413684 1047 ntBASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 AC123595.1-201ENST00000440769 1046 ntBASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTCH2Q9Y6C5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.14■■□□□ 1.78
PTCH2Q9Y6C5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PTCH2Q9Y6C5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTCH2Q9Y6C5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.13■■□□□ 1.77
PTCH2Q9Y6C5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTCH2Q9Y6C5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
PTCH2Q9Y6C5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.12■■□□□ 1.77
PTCH2Q9Y6C5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.12■■□□□ 1.77
PTCH2Q9Y6C5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
PTCH2Q9Y6C5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PTCH2Q9Y6C5 MIR6084-201ENST00000622012 110 ntBASIC26.12■■□□□ 1.77
PTCH2Q9Y6C5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTCH2Q9Y6C5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PTCH2Q9Y6C5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PTCH2Q9Y6C5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PTCH2Q9Y6C5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.11■■□□□ 1.77
PTCH2Q9Y6C5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.11■■□□□ 1.77
PTCH2Q9Y6C5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PTCH2Q9Y6C5 NTF6G-201ENST00000591094 616 ntBASIC26.11■■□□□ 1.77
PTCH2Q9Y6C5 AC009086.3-201ENST00000623486 1008 ntBASIC26.11■■□□□ 1.77
PTCH2Q9Y6C5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCH2Q9Y6C5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 ESRRAP2-201ENST00000418437 1549 ntBASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 AC131274.2-201ENST00000580697 1507 ntBASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 CCDC92B-201ENST00000575506 885 ntBASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 AL358852.1-201ENST00000623174 1268 ntBASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PTCH2Q9Y6C5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCH2Q9Y6C5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
PTCH2Q9Y6C5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.09■■□□□ 1.77
PTCH2Q9Y6C5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCH2Q9Y6C5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCH2Q9Y6C5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PTCH2Q9Y6C5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCH2Q9Y6C5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCH2Q9Y6C5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PTCH2Q9Y6C5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PTCH2Q9Y6C5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PTCH2Q9Y6C5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PTCH2Q9Y6C5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
PTCH2Q9Y6C5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
PTCH2Q9Y6C5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.08■■□□□ 1.77
PTCH2Q9Y6C5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.08■■□□□ 1.77
PTCH2Q9Y6C5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PTCH2Q9Y6C5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms