Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 IRS3P-201ENST00000223076 1006 ntBASIC35.21■■■■□ 3.23
CDC42BPBQ9Y5S2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC35.21■■■■□ 3.23
CDC42BPBQ9Y5S2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC35.21■■■■□ 3.23
CDC42BPBQ9Y5S2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
CDC42BPBQ9Y5S2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
CDC42BPBQ9Y5S2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC35.21■■■■□ 3.23
CDC42BPBQ9Y5S2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC35.2■■■■□ 3.23
CDC42BPBQ9Y5S2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC35.2■■■■□ 3.23
CDC42BPBQ9Y5S2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
CDC42BPBQ9Y5S2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
CDC42BPBQ9Y5S2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC35.2■■■■□ 3.23
CDC42BPBQ9Y5S2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC35.2■■■■□ 3.23
CDC42BPBQ9Y5S2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC35.2■■■■□ 3.22
CDC42BPBQ9Y5S2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CDC42BPBQ9Y5S2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC35.19■■■■□ 3.22
CDC42BPBQ9Y5S2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC35.18■■■■□ 3.22
CDC42BPBQ9Y5S2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CDC42BPBQ9Y5S2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC35.18■■■■□ 3.22
CDC42BPBQ9Y5S2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
CDC42BPBQ9Y5S2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC35.18■■■■□ 3.22
CDC42BPBQ9Y5S2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CDC42BPBQ9Y5S2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC35.17■■■■□ 3.22
CDC42BPBQ9Y5S2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CDC42BPBQ9Y5S2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC35.17■■■■□ 3.22
CDC42BPBQ9Y5S2 HES6-206ENST00000409574 738 ntTSL 2 BASIC35.17■■■■□ 3.22
CDC42BPBQ9Y5S2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC35.17■■■■□ 3.22
CDC42BPBQ9Y5S2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CDC42BPBQ9Y5S2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC35.17■■■■□ 3.22
CDC42BPBQ9Y5S2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC35.17■■■■□ 3.22
CDC42BPBQ9Y5S2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
CDC42BPBQ9Y5S2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC35.16■■■■□ 3.22
CDC42BPBQ9Y5S2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC35.15■■■■□ 3.22
CDC42BPBQ9Y5S2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC35.15■■■■□ 3.22
CDC42BPBQ9Y5S2 AL031602.1-201ENST00000633169 911 ntBASIC35.15■■■■□ 3.22
CDC42BPBQ9Y5S2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CDC42BPBQ9Y5S2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC35.15■■■■□ 3.22
CDC42BPBQ9Y5S2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC35.15■■■■□ 3.22
CDC42BPBQ9Y5S2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC35.14■■■■□ 3.22
CDC42BPBQ9Y5S2 SLC6A10P-202ENST00000431994 2058 ntBASIC35.14■■■■□ 3.22
CDC42BPBQ9Y5S2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC35.14■■■■□ 3.22
CDC42BPBQ9Y5S2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC35.14■■■■□ 3.22
CDC42BPBQ9Y5S2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC35.13■■■■□ 3.22
CDC42BPBQ9Y5S2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
CDC42BPBQ9Y5S2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
CDC42BPBQ9Y5S2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
CDC42BPBQ9Y5S2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC35.12■■■■□ 3.21
CDC42BPBQ9Y5S2 AC241377.3-202ENST00000626088 1088 ntBASIC35.12■■■■□ 3.21
CDC42BPBQ9Y5S2 AC241585.3-202ENST00000628937 1088 ntBASIC35.12■■■■□ 3.21
CDC42BPBQ9Y5S2 AC245100.8-202ENST00000629247 1058 ntBASIC35.12■■■■□ 3.21
CDC42BPBQ9Y5S2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
CDC42BPBQ9Y5S2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
CDC42BPBQ9Y5S2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC35.11■■■■□ 3.21
CDC42BPBQ9Y5S2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC35.11■■■■□ 3.21
CDC42BPBQ9Y5S2 IKBKGP1-201ENST00000612193 1073 ntBASIC35.11■■■■□ 3.21
CDC42BPBQ9Y5S2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
CDC42BPBQ9Y5S2 SP2-202ENST00000613139 908 ntTSL 5 BASIC35.1■■■■□ 3.21
CDC42BPBQ9Y5S2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC35.1■■■■□ 3.21
CDC42BPBQ9Y5S2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC35.1■■■■□ 3.21
CDC42BPBQ9Y5S2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC35.1■■■■□ 3.21
CDC42BPBQ9Y5S2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 KRT18P5-201ENST00000436075 1291 ntBASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CDC42BPBQ9Y5S2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CDC42BPBQ9Y5S2 BX842568.3-201ENST00000418104 571 ntBASIC35.08■■■■□ 3.21
CDC42BPBQ9Y5S2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC35.08■■■■□ 3.21
CDC42BPBQ9Y5S2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC35.08■■■■□ 3.21
CDC42BPBQ9Y5S2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC35.08■■■■□ 3.21
CDC42BPBQ9Y5S2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CDC42BPBQ9Y5S2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC35.08■■■■□ 3.21
CDC42BPBQ9Y5S2 AC034268.1-201ENST00000441047 882 ntBASIC35.07■■■■□ 3.2
CDC42BPBQ9Y5S2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC35.07■■■■□ 3.2
CDC42BPBQ9Y5S2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC35.07■■■■□ 3.2
CDC42BPBQ9Y5S2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
CDC42BPBQ9Y5S2 AC233992.3-201ENST00000607491 485 ntBASIC35.06■■■■□ 3.2
CDC42BPBQ9Y5S2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC35.06■■■■□ 3.2
CDC42BPBQ9Y5S2 SLC47A1P1-202ENST00000449666 945 ntBASIC35.06■■■■□ 3.2
CDC42BPBQ9Y5S2 AC090192.1-201ENST00000517740 490 ntBASIC35.06■■■■□ 3.2
CDC42BPBQ9Y5S2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC35.05■■■■□ 3.2
CDC42BPBQ9Y5S2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC35.04■■■■□ 3.2
CDC42BPBQ9Y5S2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC35.04■■■■□ 3.2
CDC42BPBQ9Y5S2 MPST-208ENST00000628507 698 ntTSL 5 BASIC35.04■■■■□ 3.2
CDC42BPBQ9Y5S2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CDC42BPBQ9Y5S2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC35.04■■■■□ 3.2
CDC42BPBQ9Y5S2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CDC42BPBQ9Y5S2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
CDC42BPBQ9Y5S2 AC009086.3-201ENST00000623486 1008 ntBASIC35.03■■■■□ 3.2
CDC42BPBQ9Y5S2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
CDC42BPBQ9Y5S2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CDC42BPBQ9Y5S2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CDC42BPBQ9Y5S2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms